Protein Model on 3wpb_A_1_F_1 (TEMPLATE: 3wpb )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [752 aa] Toll-like receptor 9 :Q2EEY0_HORSE
2 b F 1 (A) non-polymer(SO4) SULFATE ION 96Q(R) 101L(A) 102K(R) (identity: 0.0 %/28.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3wpb_A_1 identity=28.8%
queryA        42:LTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK--VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK: 139
                :** **  **     * *  *    *          *  **** *         *              *    **   **     *  * *   *     :
3wpb_A_1     190:LTTVPRSLPPSLEYLLLSYNHIVTLAPEDLANLTALRVLDVGGN---------CRRCDHARNPCVECPH-KFPQLHSDTFSHLSRLEGLVLKDSSLYQLN: 279
SecStr          : SS  SS  TT SEEE  SS   EE GGGGTT TT SEEE  SS---------SB  TT SS   B  T-T  EE TTTTTT TT  EEE  SS  S   :    
ExpBur          :beebbeebbeebeebbbbbbebeebbeebbeebeebeebbbbbb---------bebbeeeeeeeeebee-eeeebeeebbeebeebebbbbebbbbeebe:    
Contact         :                                                      b    bbb                                      

queryA       140:NNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTE: 239
                :   *    **  **** * *      *                 * *            *  * ** *  *  *                   * **   :
3wpb_A_1     280:PRWFRGLGNLTVLDLSENFLYDCITKTKA--------------FQGL----------AQLRRLNLSFNYHKKVS--------------FAHLTLAPSFGS: 341
SecStr          :GGGGTT TT  EEE TTSS TTGGGT  T--------------TTT ----------TT  EEE TT   TT  -------------- B     GGGGG:    
ExpBur          :eebbeebeebeebbbbebbbbebbeebeb--------------beeb----------eebeebebbebbbeeee--------------ebebebbebbeb:    

queryA       240:KLCL-ELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI: 338
                : * * **    *   ***   *               *  * *  *  *      *   * * *  *  * *                            :
3wpb_A_1     342:LLSLQELDMHGIFFRSLSQKTLQPLA-------RLPMLQRLYLQMNFINQAQLGIFKDFPGLRYIDLSDNRISGAVEXXXXXXXXXXXXXXXXXXXXXXX: 434
SecStr          : TT  EEE TTS BSEESTTTTGGGT-------T TT  EEE  SS   EE GGGGTT TT  EEE  SS   SS  -----------------------:    
ExpBur          :bebbeebbbbbbbbeebeeebbebbb-------ebeebeebbbbebebeebebbbbeebeebebbbbbebebebeee-----------------------:    

queryA       339:SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDL: 438
                :         **          *    *        **  *  *  * **    *        ** *    *  * *  **        *  *  ** ***:
3wpb_A_1     435:XXXXXXXXEDFMPSCKNLSFTLDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSIS-QAVNGSQFVPL--TSLQVLDLSHNKLDLYHGRSFTELPRLEALDL: 531
SecStr          :--------  SS  STTSS EEE TTS  SS  GGGGTT TT  EEE TTS   -  BSS SSTT --TT  EEE  SS    B TTTTTT TT  EEE :    
ExpBur          :--------eebbeebeebebbbbbbebebeebeeebbeebeebbbbebbebebe-bebebebbeeb--eebbbbbbbebebbbbeeebbebbeebebbbb:    

queryA       439:GLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP-----------FQPLRNLTILDLSNNNIANINDDMLE: 527
                :  *       *    *    *   *    ** *  *      * *       **     * *            ** ** *  **** *         * :
3wpb_A_1     532:SYNSQPFSMRGV---GHNLSFVAQLPTLRYLSLAHNGIHSRVSQQLCSTSLWALDFSGNSLSQMWAEGDLYLRFFQGLRSLIRLDLSQNRLHTLLPCTLG: 628
SecStr          : S   TT STTS--- B GGGGTT TT  EEE TT   SSSB S  EESS  EEE TTS HHHHHHSTTTTTTTTTEETT  EEE  SS      HHHHT:    
ExpBur          :bebeeeeebeee---ebebebbeebeebebbbbbebebeeebeeebebebbebbbbbbbbbeebbeeeeebeebbbbbeebeebbbbebebeebeeebbb:    

queryA       528:GLEK-LEILDLQHNNLARL-WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV: 625
                : * * *  * *  * **   *           *  *  *  * *  *               *   *   *         *     *  ***  *    *:
3wpb_A_1     629:NLPKSLQLLRLRNNYLAFFNWSS---------LTLLPNLETLDLAGNQLKALSNGSLPSGTQLQRLDVSRNSIIFVVPGFFALATRLRELNLSANALRTV: 719
SecStr          :TS TT  EEE TT       GGG---------GGGSTT  EEE TTS   EE SS   TT    EEE TTS   EE TTTTTT TT  EEE  SS  S  :    
ExpBur          :bbbeebebbbbeebebeebebeb---------beebeebebbbbbbbebebbbeeebbeebebeebbbbebebeebeeebbeebeebeebebbebebeeb:    

queryA       626:EKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 696
                :*   **     *  **   **  * *   * **          * * *   *  *    *      *   *:
3wpb_A_1     720:EPSWFGFLAGSLEVLDVSANPLHCACG--AAFVDFLLQVQAAVPGLPSRVKCGSPGQLQGRSIFAQDLRLC: 788
SecStr          : GGGGSS GGG SEEE  S  EE  TT-- THHHHHHHTGGG TTHHHHSBEEESGGGTTSBTT HHHHT :    
ExpBur          :eeebbeeebeebeebebbebebebeee--bebbebbbebeebbebbbbebebbbeeebeeebbbeeebeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123