Protein Model on 4bsr_A_1_E_1 (TEMPLATE: 4bsr )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [483 aa] LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5 :LGR5_HUMAN
2 b E 1 (E) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 467K(N) 469L(S) (identity: 0.0 %/36.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4bsr_A_1 identity=36.1%
queryA       437:DLGLNEIGQELTGQEWRGLENIFEIYL--SYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSP-SPFQPLRNLTILDLSNNNIANINDDMLEGLEKLE: 533
                :**** *    *           *  **  * *   **  *     ***  *   * *       *   *  *  *  * * **         *  *  * :
4bsr_A_1      47:DLGLSELPSNLS---------VFTSYLDLSMNNISQLLPNP---LPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQ: 134
SecStr          :SS  SS  SS  ---------TTEEEEE  S   SS  SS ---    TT  EEE TT   S   TTTTSS TT  EEE  SS  SB  TTTTTT TT  :    
ExpBur          :eeebeebbeebb---------bebbbbbbbebebeebbeee---eeebeebebbebbebebeebeeebbebbeebebbbbbebebeebbeebbeebeebe:    
Contact         :                                b b                                                                 

queryA       534:ILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA: 633
                : * *  *             *     **  *  * *  *   ****  *  *  *    * **     *   * *  **  * *  * * *  ** *   :
4bsr_A_1     135:SLRLDANHISYV--------PPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFD-G: 225
SecStr          :EEE  SS   B -------- TTSSTT SS  EEE  SS   S  HHHHTT TT  EEE  SS   EE TTTTTT TT  EEE  SS   EE TTTT -S:    
ExpBur          :bbebbebebeeb--------beebbeebeebeebebbebebeebbeebbeebebbeebbbbebebeebeeebbeebeebeebebbebebeebbeebbe-b:    

queryA       634:FRNLTELDMRFNPFD: 648
                :   *  **   *  *:
4bsr_A_1     226:LHSLETLDLNYNNLD: 240
SecStr          : SS  EEE  SS  S:    
ExpBur          :beebebbbbbebebe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123