Protein Model on 5uf1_A_1_C_1
(TEMPLATE: 
5uf1
)Protein Model on 5uf1_A_1_C_1
(TEMPLATE: 5uf1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [241 aa] | O13 | |
| 2 | b | C 1 (C) | branched(oligosaccharide) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 536D(W) 568N(A) 570E(D) 592D(Y) 595L(S) 616N(L) 618Q(C) 619K(C) 644F(Y) (identity: 0.0 %/36.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5uf1_A_1 identity=36.7% |
queryA 510:ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQ: 609
: * * * * * * * * * * * * * * ** * ** ** ** * * ** * * ** ** :
5uf1_A_1 38:VLYLNDNQITKLEPGVFDRLVNLQTLWLNNNQLTSL--------PAGLFDSLTQLTILALDSNQLQALPVGVFGRLVDLQQLYLGSNQLSALPSAVFDRL: 129
SecStr :EEE SS TTTTTT TT EEE SS -------- TTTTTT TT EEE SS TTTTTT TT EEE SS S TTTTTT :
ExpBur :bbebbebebeebeeeebeebeebebbbbbebebeeb--------eeebbeebeebebbbbeebebeebeeebbeebeebeebebbebebeebbeebbeeb:
Contact : b b b b b
queryA 610:VSLKSLNLQKNLITSVE-------------------KKVFGPAFRNLTELDMRF---NPFDCTCESIAWFVNWINETHTNI: 668
:* ** * * * * ** * * ** ** * * ** ** *:
5uf1_A_1 130:VHLKELLMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRDIMYLRNWVAD-HTSI: 209
SecStr :TT EEE SS S TTGGG TT SEEE SS TTTTTT TT EEE TTS B TTBGGGHHHHHHHHH- TTT:
ExpBur :eebebbbbbebbbeebbebbbebeebeebbbbebebeebeeebbeebeebeebbbbebebebebeebbbbeebbee-eeeb:
Contact : b bb b bb b b
|
[assembly_id:1]
[help]