CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [258 aa] | Internalin B,REPEAT MODULES,Variable lymphocyte receptor B :A4L9V2_LISMN:Q4G1L3_EPTBU | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [155 aa] | Interleukin-6 :IL6_HUMAN | 485L 486M(A) 512D(T) 514S(E) 534I(E) 536D(Q) 538Q(W) 566I(Y) 568N 571S(F) 592D 595L(Y) 616N(R) 618Q(Y) 619K(Q) 643R(H) 644F(D) (identity: 17.6 %/34.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4j4l_A_1 identity=34.1% |
queryA 479:VPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIP: 578 : * * * * * * *** * * * * * * * * * * * * * *** * *: 4j4l_A_1 55:LPNVRYLALGGNKLHDI----SALKELTNLTYLTLEPNQLQSLPNGVFDKLTNLKELQLWANQLQSL--------PDGVFDKLTNLTYLNLAFNQLQSLP: 142 SecStr : TT EEEEEETT B ----GGGTT TT EEEEEESS TTTTTT TT EEEE TTT S -------- TTTTTT TT SEEE TTS S : ExpBur :beebeebbbbbeebeeb----ebbeebeebbebbbebeebeebeeebbeebeebeebebbbeebeeb--------eeebbeebeebbbbbbbebebeebe: Contact : bb b b b b b b b b queryA 579:VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNI: 668 : ** * * ** * * ** ** ** * * * ** ** * ** **** * *** * : 4j4l_A_1 143:KGVFDKLTNLTELDLSYNQLQSLPKGVFDKLTQLKDLRLYQNQLKSVPDGVFD-RLTSLQYIWLHDNPWDCTCPGIRYLSEWINK-HSGV: 230 SecStr :TTTTTT TT SEEE SS TTTTTT TT EEE SS S TTTTT-T TT EEE SS B TTTTHHHHHHHHH-TTTT: ExpBur :eebbeebeebbebbbbebebeebeebbbeebeebebbebbebebeebeeebbe-ebeebeebbbbebebebeeeebebbbebbee-eeeb: Contact : b b b bb bb |