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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [266 aa] | Platelet glycoprotein Ib alpha chain :GPBA_HUMAN | |
2 | b | C 1 (B) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 134S(E) 136Q(K) 157N 158G(N) (identity: 25.0 %/33.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1qyy_A_1 identity=33.1% |
queryA 30:VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLE---------------------PELCQKLPMLKVLNLQH: 108 : ** * ** * *** * * * * * * * ** * ** * * * ** * ** : 1qyy_A_1 10:ASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSF: 109 SecStr :SSSEEEE SS SS TT TTEEEEE SS SEEEGGGGTT TT EEE TTS EEE S TT EEE SS SS TTT TT EEE S: ExpBur :eeebebebbeeebeebbeebbeebbbbbbbebebeebbbbebeebeebeebbbbebebeebeeeeebeebbebbbbebebeebbebbebbeebebbbbbe: queryA 109:NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKI: 183 :* * * * ** * * * * * * * * **** *** * : 1qyy_A_1 110:NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL: 184 SecStr :S S TTTTTT TT EEE TTS TTTTTT TT EEE SS TTTTTT SS EEE SS : ExpBur :bebeebeeebbeebeebeebebbbbebeebbeebbeebeebeebbbbebebeebeeebbeebeebebbbbbebeb: Contact : b b bb |