[pdbjlvh2]Protein Model on 5z8y_A_1_B

Protein Model on 5z8y_A_1_B_1 (TEMPLATE: 5z8y )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [328 aa]	Leucine-rich repeat transmembrane neuronal protein 2 :LRRT2_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [178 aa]	Neurexin-1-beta :NRX1B_HUMAN	682H 684H(Q) 685G (identity: 66.7 %/31.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5z8y_A_1 identity=31.0%

queryA       384:LSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQ: 483
                :* **        *    * *   * *  * *  * **    ***  *  *  * *  * *   *       * *     ** *    *    *     **:
5z8y_A_1      31:LGLSLRHNHITELERDQFASF--SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY-LPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQ: 127
SecStr          :SEEE TTS   EE TTTTSS --TT SEEE  S    EE TTTTTT TT  EEE  SS    -  TTTTTT TT  EEE  SS      TTTTTT TT  :    
ExpBur          :ebbbbeebebeebeeebbebb--eebebbebbebebeebeeebbebbeebeebbbbebebee-bbeebbeebeebebbbbbebebeebeeebbebbeebe:    

queryA       484:RLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK: 583
                : * **   *         *   * *  **** *           ** **  * * ** *              **  ** ** * *  *           :
5z8y_A_1     128:TLHLRSNSLRTI--PVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKI-------NFAHFLR-LSSLHTLFLQWNKISNLTCGMEW: 217
SecStr          :EEE  S      -- TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS   EE-------EGGGGTT-  S  EEE  SS   EEE SS  :    
ExpBur          :ebebeebebeeb--beebbebbebbebbbbbebebeebeeebbbebeebeebbbbebebeeb-------ebbebee-beebebbbbbebebeebbbeeeb:    

queryA       584:DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT---CESIAWFVNWINETHTNIPELSSHYLCNTP: 680
                :    *   **  *        **     ** *    *   *   *      * **      *   *    *    *           *       **  *:
5z8y_A_1     218:TWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILN-SLRSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSI-------LCHSP: 309
SecStr          :  TT  EEE TTS   EE TTTTTS TT  EEE  SS      HHHHT-T  S SEEE TTS  B SGGGHHHHHHHHH  SEESS  -------B  BS:    
ExpBur          :ebeebeebbbbbbebeebeeebbebbeebeebbbbebebebbeeebbe-bbeebebbbbbebebebeeebeebbebbeebeeeeeeeb-------ebeee:    

queryA       681:PHYHG: 685
                : *  *:
5z8y_A_1     310:DHTQG: 314
SecStr          :GGGTT:    
ExpBur          :eebee:    
Contact         : b bb

Protein Model on 5z8y_A_1_B_1 (TEMPLATE: 5z8y )

Input Residue Numbers for Focused Sites