[pdbjlvh2]Protein Model on 5lfn_A_1_B

Protein Model on 5lfn_A_1_B_1 (TEMPLATE: 5lfn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [324 aa]	Chondroadherin :CHAD_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [324 aa]	Chondroadherin :CHAD_HUMAN	78T(I) 79S(Y) 102K(T) 103V(Y) 126T(F) 151T(W) (identity: 0.0 %/32.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5lfn_A_1 identity=32.0%

queryA        52:NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLIT: 151
                :*   * * * * *   *  *    **  *    * *  *       *  *  * * **    *         **  * *  * *       *   * *  :
5lfn_A_1      54:NLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRW: 153
SecStr          :T  EEE TTS   EE TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS   EE TTTTTT TT  E:    
ExpBur          :ebebbbbbebebeebbebbbeebeebeebebbebebeebeebbbeebeebbebebbebebeebeeebbeebeebebbbbbebebeebeebbbebbeebee:    
Contact         :                          bb                      bb                      b                        b

queryA       152:LDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR-LFGLFLNNVQLGPSLTEKLCLE--LANT: 248
                :* ** * ***   *     ***       *      *  *          * ** *  *      *   ** *  * * *  *     **      *  *:
5lfn_A_1     154:LYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKL--RVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNL-----EKFSDGAFLGVT: 246
SecStr          :EE  SS   EE TTTTGGGTT SEEE  SS   S  HHHHTT --SS SEEE  SS   EE TTTTGGGTTT  EEE TTS  ----- EE TTTTTT  :    
ExpBur          :bbbbebbbeebeeebbeebeebbbbbbbebebeebbeebbeeb--eebebbbbbebebeebeeebbebbbeebebbebbebeb-----eebbebbbeebe:    

queryA       249:SIRNLSLSNSQLST-TSNTTFLGLKWTNLT: 277
                :      * *  *    **  *  *    **:
5lfn_A_1     247:TLKHVHLENNRLNQLPSNFPFDSLETLALT: 276
SecStr          :   EEE  SS      TT   SS  EEE  :    
ExpBur          :ebeebbbeebebeebbeebbbeebeebebe:

Protein Model on 5lfn_A_1_B_1 (TEMPLATE: 5lfn )

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