Protein Model on 3wpc_A_1_B_1
(TEMPLATE: 
3wpc
)Protein Model on 3wpc_A_1_B_1
(TEMPLATE: 3wpc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [747 aa] | Toll-like receptor 9 :Q2EEY0_HORSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [749 aa] | Toll-like receptor 9 :Q2EEY0_HORSE | 100M(H) 102K(R) 206S(F) 283Y(M) 285N(F) 307Y(D) 364D(R) 366D(N) 368P(V) 388N(H) 389S(N) 390F(S) 392S 418K 443I(Q) 446E(S) 447L(M) 448T(R) 449G 479V(R) 501P(Q) 520N(T) 521I(L) 544R(F) 599N(I) 621L(A) 623T(R) 678N(G) 679T(S) 680P 681P(G) 684H(Q) (identity: 12.5 %/29.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3wpc_A_1 identity=29.0% |
queryA 42:LTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK--VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK: 139
:** ** ** * * * * * **** * * * ** ** * * * * :
3wpc_A_1 190:LTTVPRSLPPSLEYLLLSYNHIVTLAPEDLANLTALRVLDVGGN---------CRRCDHARNPCVECPH-KFPQLHSDTFSHLSRLEGLVLKDSSLYQLN: 279
SecStr : SS SS TT SEEE TTS EE GGGGTT TT SEEE TTS---------S GGG SS T-T EE TTTTTT TT EEE SS S :
ExpBur :beebbeebbeebeebbbbbbebbebbbebbeebeebeebbbbbb---------bbbbeeeeeeeeebee-eeeeeeeebbeebeebebbbbebbbbeebe:
Contact : b bbb
queryA 140:NNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTE: 239
: * ** **** * * * * * * * ** * * * * ** :
3wpc_A_1 280:PRWFRGLGNLTVLDLSENFLYDCITKTKA--------------FQGL----------AQLRRLNLSFNYHKKVS--------------FAHLTLAPSFGS: 341
SecStr :GGGTTT TT EEE TTSS TTHHHH T--------------TTT ----------TT EEE TT SS --------------BS GGGGG:
ExpBur :eebbeebeebbebbbbbbbbbebbeebeb--------------beeb----------eebeebebbbbbeeeee--------------beebebbebbeb:
Contact : b
queryA 240:KLCL-ELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI: 338
: * * ** * *** * * * * * * * * * * * * * :
3wpc_A_1 342:LLSLQELDMHGIFFRSLSQKTLQPLA-------RLPMLQRLYLQMNFINQAQLGIFKDFPGLRYIDLSDNRISGAVEXXXXXXXXXXXXXXXXXXXXXXX: 434
SecStr : TT EEE TTS BSEE TTTTGGGT-------T TT EEE SS EE GGGGTT SS EEE SS SS -----------------------:
ExpBur :bebbeebbbbbbbbebbeeebbebbb-------ebeebeebbbbebebeebebbbbeebeebebbbbbebebebeee-----------------------:
Contact : b b b
queryA 339:SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDL: 438
: ** * * ** * * * ** * ** * * * * ** * * ** ***:
3wpc_A_1 435:XXXXXXXXEDFMPSCKNLSFTLDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSIS-QAVNGSQFVPL--TSLQVLDLSHNKLDLYHGRSFTELPRLEALDL: 531
SecStr :-------- SS STTSS EEE SS SS GGGGTT TT SEEE TTS - S TTTT --TT EEE SS TTTTTT TT EEE :
ExpBur :--------eebbeebeebebbbbbbebebeebeeebbeebeebebbebbebebe-bebebebbeeb--eebbbbbbbebebebeeeebbebbeebebbbb:
Contact : b b b bbb b b
queryA 439:GLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP-----------FQPLRNLTILDLSNNNIANINDDMLE: 527
: * * * * * ** * * * * ** * * ** ** * **** * * :
3wpc_A_1 532:SYNSQPFSMRGV---GHNLSFVAQLPTLRYLSLAHNGIHSRVSQQLCSTSLWALDFSGNSLSQMWAEGDLYLRFFQGLRSLIRLDLSQNRLHTLLPCTLG: 628
SecStr :TT HHHHTSTT --- GGGGG TT EEE TTS SSS S EESS EEE SS HHHHHTSTTTTTTTTTEETT EEE SS S HHHHT:
ExpBur :bebeebbeeeee---ebebebbeebeebebbbbbebebbeebbeebebebbebbbbbbbbbeebbeeeeebeebbbbbeebebbbbbebebeebeeebbb:
Contact : b bbbb b b bb b bb
queryA 528:GLEK-LEILDLQHNNLARL-WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV: 625
: * * * * * * ** * * * * * * * * * * * * *** * *:
3wpc_A_1 629:NLPKSLQLLRLRNNYLAFFNWSS---------LTLLPNLETLDLAGNQLKALSNGSLPSGTQLQRLDVSRNSIIFVVPGFFALATRLRELNLSANALRTV: 719
SecStr :TS TT EEE TTS S GGG---------GGGSTT EEE TTS EE SS S TT EEE TTS EE TTTTTT TT EEE SS S :
ExpBur :bbbeebebbebeebebeebebeb---------beebeebebbbbbbbebebbbeeebbeebebeebebbebebeebeeebbeebeebeebebbebebeeb:
Contact : b b b b
queryA 626:EKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHG: 685
:* ** * ** ** * * * ** * * * * * *:
3wpc_A_1 720:EPSWFGFLAGSLEVLDVSANPLHCACX--AAFVDFLLQVQAAVPGLPSRVKCGSPGQLQG: 777
SecStr : GGGGTT TT SEEE S EE --- HHHHHHHHTGGGSTTHHHH BEEESGGGTT:
ExpBur :ebebbeeebeebeebbbbebebebee---eebbebbbebeebbebbbbebebebeeeeee:
Contact : bbbb b
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[assembly_id:1]
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