Protein Model on 1o77_A_1_B_1 (TEMPLATE: 1o77 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [141 aa] TOLL-LIKE RECEPTOR 2 :TLR2_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [135 aa] TOLL-LIKE RECEPTOR 2 :TLR2_HUMAN 800L(I) 804V(I) 827C(S) 828K 832V(L) 833H(D) 834H(F) 835A(S) 836V(H) 838Q(R) 862H(Q) 863A(R) 865C 866L(K) (identity: 14.3 %/26.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1o77_A_1 identity=26.8%
queryA       756:YAAYIIHAYKDKDWVWEHFSSMEKED--QSLKFCLEERDFEAGVFELEAIVNSIKRSRKIIFVITHHLLKDPLCKRFKVHHAVQQAIEQNLDSIILVFLE: 853
                :* *       *  ** *     * *      * **  ***  *      *  **  * *  **      *    *                   **  **:
1o77_A_1       3:YDAFVSYSERDAYWV-ENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWSK-YELDFSHFRLFXXXXXAAILILLE: 100
SecStr          :EEEEEE  STTHHHH-HHTHHHHHHTSSS   EEEHHHH  SSS HHHHHHHHHHTEEEEEEEE HHHHHHTHHH-HHTTTGGGT  ----- EEEEE S:    
ExpBur          :ebbbbbbbeebbebb-eeebbeebeeeeeebebbbbeeebeeeeeeeebbbebbeebebbbbbbbeebbeebbeb-bbeebeeeebe-----ebbbbbbe:    
Contact         :                                              b   b                      bb   bbbbb b               

queryA       854:EIPDYKLNHALCLRRGMFKSHCILNWPVQKERIGAFRHKLQVALGS: 899
                : *         *  *        * **        *   *  *  *:
1o77_A_1     101:PIEKKAIPQRFCKLRKIMNTKTYLEWPMDEAQREGFWVNLRAAIKS: 146
SecStr          :   GGGS TT HHHHHHHHHT SEE  SSHHHHHHHHHHHHHHHT :    
ExpBur          :ebeeeebeeebeebeebbeeeebbebbeeeeeeeebbeebbebbee:    
Contact         :        bb bb                                                                                       


Input Residue Numbers for Focused Sites

ex) 2,15,123