Protein Model on 7pli_G_1 focusing on 72-th site
(TEMPLATE: 
7pli
)Protein Model on 7pli_G_1 focusing on 72-th site
(TEMPLATE: 7pli
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(7pli_G auth_asym_id:J) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 72 | Q | 75 | 73 | Q | b | 4.6 | |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(DDX1_HUMAN) | G 1 (J) | polymer(polypeptide(L)) [453 aa] | ATP-dependent RNA helicase DbpA :DBPA_ECOLI | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7pli_G_1 identity=36.4% |
queryA 3:AFSEMGVMPEIAQA-VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA: 101
:*** * * * * * ** * ** * ** * ****** ** * * * :
7pli_G_1 5:AFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQ-----------------------------: 75
SecStr : GGGGS S HHHHHHHHHHT S HHHHHHHHHHHTT EEEEE TTS HHHHHHHHHHHT SSS S -----------------------------:
ExpBur :ebeebeebeeebeebbeeeebeebeebbeebbebbeeeebbbbbbebbbebbbbbbbbbbeebebeeeebb-----------------------------:
queryA 102:FAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG: 201
: :
7pli_G_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 202:HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQ: 301
: ** * **** *:
7pli_G_1 75:--------------------------------------------------------------------------------------QALVLCPTRELADQ: 88
SecStr :-------------------------------------------------------------------------------------- EEEE SSHHHHHH:
ExpBur :--------------------------------------------------------------------------------------bbbbbbbbebbbee:
queryA 302:TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL: 401
: * * * ** * * * * ***** * * * ** **** * * ** * * :
7pli_G_1 89:VAGELRRLARFLPNTKI--LTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAP------ASR: 180
SecStr :HHHHHHHHGGGSTT E--EEE TTS HHHHHHHTTS SEEEE HHHHHHHHHHTS TT EEEETTHHHHTSHHHHHHHHHHHHHS ------SSS:
ExpBur :bbebbeebbebeeebeb--bbbbbeeeeeebeeebeeebbbbbbbbebbbebbeeebbebeebebbbbbbbbebbeeeebeebeebbeebe------eeb:
queryA 402:QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI: 501
:* *** * * * * * * * * * * :
7pli_G_1 181:QTLLFSATWPEA-IAAISGRVQRDPLAIEIDSTDALP-----------PIEQQFYETSSKGKI-------------------------PLLQ-----RLL: 238
SecStr :EEEEEES HH-HHHHGGGG SSEEEEESS TT -----------SEEEEEEE STTHH-------------------------HHHH-----HHH:
ExpBur :bbbbbbbbbbee-beeebeebbeeeeebeebeeeeeb-----------ebebbbbebeeeebe-------------------------ebbb-----ebb:
queryA 502:KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH: 601
: * ** ** ** * * **** * * * ** * * * ******* ** * * * **:
7pli_G_1 239:SLHQPSSCVVFCNTKKDCQAVCDALNEVGQ---------SALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVH: 329
SecStr :HHH SSEEEE SSHHHHHHHHHHHHHTTB--------- EEEE TTS HHHHHHHHHHHHTTS SEEEE GGGSSS TT EEEESS SSHHHHHH:
ExpBur :beeebebbbbbbbeeeebeebbebbeeeeb---------bbbbbbeeeebeebbbbbbebebebbbbbbbbebbbbbbebeebebbbbbbbbeebebbbb:
queryA 602:RIGRVGRAERMGLAISLVATEKEK: 625
:**** ** ***** * * :
7pli_G_1 330:RIGRTARAGNSGLAISFCAPEEAQ: 353
SecStr :HHTTSS TT EEEEEEE GGGHH:
ExpBur :bbbbbbbeeeebbbbbbbbeebee:
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[assembly_id:3]
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