Protein Model on 4kbf_B_1 focusing on 79-th site
(TEMPLATE: 
4kbf
)Protein Model on 4kbf_B_1 focusing on 79-th site
(TEMPLATE: 4kbf
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(4kbf_B auth_asym_id:B) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 79 | T | 75 | 75 | A | E | b | 0.0 |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(DDX1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [365 aa] | Heat resistant RNA dependent ATPase :Q72GF3_THET2 | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4kbf_B_1 identity=37.1% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
:* *** * ** *** ** * * * * ** *** ** * * * * * :
4kbf_B_1 3:FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPS---QERGRKPRALVLT--------------------: 79
SecStr :GGGS HHHHHHHHHTT S HHHHHHHHHHHTT EEEE TTSSHHHHHHHHHHHH --- TT SEEEE --------------------:
ExpBur :beebebbeebbeebeeeeeeebeebbeebbeebbeeebbbbbbeeeeebbbbbbbbbbeebeee---eeeebebbbbbbb--------------------:
queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
: :
4kbf_B_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303
: * ** * **** * :
4kbf_B_1 73:-----------------------------------------------------------------------------------PRALVLTPTRELALQVA: 89
SecStr :----------------------------------------------------------------------------------- SEEEE SSHHHHHHHH:
ExpBur :-----------------------------------------------------------------------------------bbbbbbbbeeebbeebb:
queryA 304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403
: * * ** * * * * ** **** * * * ** * ****** ** * * * :
4kbf_B_1 90:SELTAVA-----PHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSR------QT: 178
SecStr :HHHHHH -----TTS EEEE SSS HHHHHHHHHH SEEEE HHHHHHHHHTTSS TT SEEEEESHHHHHHTT HHHHHHHHHTS TTS------EE:
ExpBur :eebeebb-----ebbebbebbeeeeeeebeebbeebbbbbbbbbebbbebeeeebbebeebebbbbbebbebeeeebeeebeebbeebeeeb------bb:
queryA 404:IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE: 503
: **** * * * * * * * * ** * * ** :
4kbf_B_1 179:LLFSATLPSW-AKRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVR----------GRLEVLSDLLYVA--------SP---------------------: 238
SecStr :EEE SS HH-HHHHHHHH SS EEEE EEEEE ST----------THHHHHHHHHHHH-------- ---------------------:
ExpBur :bbbbbeeeeb-beebbeebbeeeeebeebeeeeeeeebebbebeee----------ebbeebbebbeee--------ee---------------------:
queryA 504:HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH: 601
: * * * *** * * **** ** * * * ** * ******* ** * * *** * *:
4kbf_B_1 239:---DRAMVFTRTKAETEEIAQGLLRLG---------HPAQALHGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQH: 324
SecStr :---S EEEEESSSHHHHHHHHHHHHHT--------- EE SSS STTTSSSTTSTTTTS EEEEETTTS SS BSEEEESS SSSHHHHH:
ExpBur :---ebbbbbbeeeebbeebbebbeeee---------bebebbbeeeeeeebeebbebbeeeebebbbbbeebbeeeebeebbbbbbbbbbeeeebbee:
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[assembly_id:2]
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