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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(6b4i_E auth_asym_id:E) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
676 | D | 420 | 469 | D | S | e | 65.4 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(DDX1_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [425 aa] | ATP-dependent RNA helicase DDX19B :DD19B_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6b4i_E_1 identity=34.7% |
queryA 256:VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP: 347 : * * * ** ** * * * * * *** ** * * * * * * * ** ***: 6b4i_E_1 76:LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTP: 169 SecStr :HHHSSS EEEEE -TTSSHHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTTT --TT EEEESTT TT S---EEEE H: ExpBur :bbbeeeeebbbbbbb-bbbbbbbbbbbbbbbebeeeeeebbbbbbbbeeebbeebbeebeebbeeb--eebebbbbbeeeeeeeeeebeeb---bbbbbb: queryA 348:GRLDDLVSTGK-LNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV: 445 :* * * * ****** ** * * * * *** * * * * ** * ** : 6b4i_E_1 170:GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYY: 262 SecStr :HHHHHHHTTS S GGG EEEE HHHHTTSHHHHHHHHHHHHTS ------SSSEEEEEES H-HHHHHHHHH SS EEEEE SSEEEEE: ExpBur :bbbbebbeeeebbebeebebbbbbbbbbbbeeeebbeebbebbeebb------eebbbbbbbbeeee-ebeebbeebbeeebbbebeebebebeebebbb: queryA 446:VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL: 545 :* * * * ** *** * * * *** *: 6b4i_E_1 263:VLCSSRDEKF-------------------------------QALCNLYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L: 314 SecStr :EE SSHHHHH-------------------------------HHHHHHHHHS --------EEEEE SSHHHHHHH-------HHHHHHTT EE--E: ExpBur :bebeeeeebb-------------------------------ebbeebbebbebe--------bbbbbbeeeebbeeb-------bebbeeeeeeebe--b: queryA 546:HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY: 639 : * * *** * * * * ***** * *** ** * * ***** ** *** * : 6b4i_E_1 315:SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK-----------------: 397 SecStr : SSS HHHHHHHHHHHHTTS SEEEESSSS S SSEEEEEESS B GGG B HHHHHHHHHTTT TT EEEEEEE SH-----------------: ExpBur :beebeeeeebeebeebbeeebebbbbbebbeebbebeebebbbbbbbbeeeeeebebebbbbbbbbbbbeeeebbbbbbbeee-----------------: queryA 640:NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD: 676 : * * * ** * * *: 6b4i_E_1 398:--------------HSMNILNRIQEHFNKKIERLDTD: 420 SecStr :--------------HHHHHHHHHHHHH EE SS: ExpBur :--------------ebbebbeebeeebeeebeebebe: |