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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | DB 1 (j) | polymer(polypeptide(L)) [384 aa] | Eukaryotic initiation factor 4A-I :IF4A1_HUMAN | |
2 | b | U 1 (5) | polymer(polypeptide(L)) [319 aa] | Eukaryotic translation initiation factor 3 subunit L :EIF3L_HUMAN | 574V(L) 577R 595E(N) 597Q(E) 598N (identity: 40.0 %/33.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6zmw_DB_1 identity=33.9% |
queryA 249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347 : * * * * * * * ** * **** * * *** * * * ****: 6zmw_DB_1 64:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 159 SecStr :HHHHTT EEEE TT-SSHHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTTTTT EEE---E STTHHHHTTHHHHT SEEEE H: ExpBur :bbbeeeebbbbbbeee-bebbbbbbbbbbebbeeeeebbbbbbbbbeeebbeebbebbebbbeebebebbb---bbeeeebeeebeebeeebbbbbbbbb: queryA 348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447 :** * * ****** ** * * * * ** *** * ** * * * * * : 6zmw_DB_1 160:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 252 SecStr :HHHHHHHHTT S TT EEEESSHHHHHHTT HHHHHHHHHHS TT ------EEEEE S H-HHHHHHHHH SS EEEE STTSEEEEEE: ExpBur :bebbebbeeeebeeeebebbbbbbbbebbeeebeeebbebbeebeeeb------bbbbbbeebee-ebeebbeebbeebbebbbeeeeeebebbebbebb: queryA 448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547 :* ** * * * * * ** ** * * * * **: 6zmw_DB_1 253:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG: 304 SecStr :E--------ES------------------------GGGH--HHHHHHHHHHS S----- EEEE S HHHHHHHHHHH---------HHTT EEE T: ExpBur :b--------ee------------------------eeeb--bebbbebeebbebe-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbe: queryA 548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645 :* ** * * * ** ** ***** * *** ** ** ***** ** * * ** * * *** *: 6zmw_DB_1 305:DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 397 SecStr :TS HHHHHHHHHHHHTTS SEEEE STTSSS S SEEEESS SSGGGHHHHH STT EEEEEEESTHHHHHHHH-----HHHHT EE: ExpBur :eeeeeebeebbeebeeeebebbbbbbebbeebeeeebbbbbbbbbbeeeeebbebbbebeeeeeebbbbbbbbeebeebbeeb-----eeebebebee: Contact : b b b bb |