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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [234 aa] | Probable ATP-dependent RNA helicase DDX5 :DDX5_HUMAN | |
2 | b | C 1 (A) | non-polymer(SO4) | SULFATE ION | 325G 346T 347P 348G 349R 380Y(F) (identity: 83.3 %/37.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3fe2_A_1 identity=37.1% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* * ** *** * * * * * ****** * * : 3fe2_A_1 31:FYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI------------------------------------------: 88 SecStr :TTTTT HHHHHHHHTTT S HHHHHHHHHHHHT EEEEE TTS HHHHHHHHHH------------------------------------------: ExpBur :beebebeeebeebbeeeeeeebebbbbbbbbbbeeeebbbbbbeeebebebbbbbbbb------------------------------------------: queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 3fe2_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP------------NAPKALI: 291 : * * : 3fe2_A_1 89:---------------------------------------------------------------------------------VHINHQPFLERGDGPICLV: 107 SecStr :---------------------------------------------------------------------------------HHHHTS TT SEEE: ExpBur :---------------------------------------------------------------------------------bbbeeeeebeeeebbbbbb: queryA 292:VEPSRELAEQTLNNIKQFK-KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ: 390 : * **** * * * * * ** * ** ** * ***** * ** ** ******* * * * *: 3fe2_A_1 108:LAPTRELAQQ----VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ: 203 SecStr :E SSHHHHHH----HHHHHHHHHHHTT EEEE TTS HHHHHHHHHH SEEEE HHHHHHHHHHTS TT EEEETTHHHHHHTT HHHHHHHHTT: ExpBur :bbbbeebbee----beeebeebbeebebebbbbbeeeeeeebbeebeebbbbbbbbbebbbebbeeeebbbebbbbbbbbbbbebbeeebeeebeebbee: Contact : b bbbb b queryA 391:IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM: 423 :* * *** * * * : 3fe2_A_1 204:I------RPDRQTLMWSATWPK-EVRQLAEDFL: 229 SecStr :S------ SS EEEEEES H-HHHHHHHHH : ExpBur :b------eeebbbbbbbeeeee-ebeebbeebb: |