Protein Model on 7drb_D_1_R_1 (TEMPLATE: 7drb )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) D 1 (D) polymer(polypeptide(L)) [752 aa] Membrane-localized LRR receptor-like protein :A0A2I8B6R1_NICBE
2 b R 1 (R) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 449R(K) 451I(T) 479C (identity: 33.3 %/29.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7drb_D_1 identity=29.4%
queryA        65:VTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDNQLPQI---PSGLPESLTELSLIQNNIYNI: 161
                : *  *** *         *  *  *   **    *        ** *   * *    *   * *        **      **    *  * *  *     :
7drb_D_1     266:LTSIDLSNNQLDGQIDDRFGNLMYLEHLNLANELNLKG-----GIPSSFGNLTRLRYLDMSNTRTY----QWLPELFVRLSGSRKTLEVLGLNDNSMFGS: 356
SecStr          :  EEE  SS  BS   GGGGGSTT  EEE  S SB  S----- S SGGGG  S  EEE TTS   ----  HHHHHHHHGGGTTT  EEE  SS   S :    
ExpBur          :bebbebbebebeeebbeebbebeebeebbbbebeebee-----bbbebbeebeebeebbbbebebe----bebbebbeebbebeeebebbbbbebebebe:    

queryA       162:TKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLP--SSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPR: 259
                :      *   ** ***  *       *        *     ** * ** *      * *    *** * *               *  *  ** * *   :
7drb_D_1     357:LVD-VTRFSALKRLYLQKNVLNGFFMER-------FGQVSSLEYLDLSDNQMRGPLPDLALFPSLRELHLGSNHFNGRIPQGIGKLSQLKILDVSSN---: 445
SecStr          :B  -STT TT  EEE TTS   SBB   -------S      SEEE  S   EEE   GGG TT SEEE  SSEEESS  GGGGG SS  EEE TTS---:    
ExpBur          :bee-bbebeebeebebbebebebebebe-------eeeebebbbbbbbebebebebbebeebebbeebbbbebebeeebeebbbebeebeebbbbeb---:    

queryA       260:CFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLP--RLEILDLSFNYIKGSYPQHI: 357
                :         *   *   *   *         *  *  *    *      *   *  *** ** *            **   *    *       * *   :
7drb_D_1     446:----RLEGLPESMGQLSNLESF------DASYNVLKGT----ITESHLSNLSSLVDLDLSFNSLALKTS----IDWLPPFQLQVINLPSCNLGPSFPKWL: 527
SecStr          :----      GGGGG S   EE------E TTS  EEE----EETTTT S  S  EEE  S EEEEE  ----TT   S   SEEE TTEE  SS  GGG:    
ExpBur          :----ebebbbeebbebeebeeb------ebbebebeee----beeebbeebeebeebbbbebebbbeee----eebebebebeebebbebebbeebbebb:    

queryA       358:NISRNFSKL-LSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS---PLVKDT--------RQSYANSS: 445
                :    *   *  **                 *  *   *     **  * *      *  *      * ** *  *   ***            *     *:
7drb_D_1     528:QSQNNYTVLDISLANI-------SDALPSWFSGLP--PDIKILNLSNNQISGRVSDLIENAYDYMVIDLSSNNFSGPLPLVPTNVQIFYLHKNQFFGSIS: 618
SecStr          :GT    SEEE  SS  ------- SB  GGGGS  --TT SEEE  SS  EE  TTTS SSS   EEE  SSEEEES     SS  EEE  SSEE S   :    
ExpBur          :eebeebebbbbbebeb-------eeeeeeebeebb--eebebbbbbebebeeebeeebeeeeebbbbbbbebebebebbebbeebbbbbbbebebeeebe:    

queryA       446:SFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQC---AAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRL: 542
                :*         * *           *   *  * *   *     * *  *      *     *     *    **    *     *       ***  * *:
7drb_D_1     619:SICKSTTGATSLDLSHN------QFSGEL--PDCWMNATNLAVLNLAYNNFSGKLPQSLGSLTNLEALYMRQNSFSGML--PSLSQCQSLQILDLGGNKL: 708
SecStr          :HHHHTT   SEEE  S ------      -- S GGGG    EEE  SS   S   HHHHH  S SEEE TT   EEE --   TT TT  EEE TTSEE:    
ExpBur          :ebbeeebebbbbbbbeb------ebebeb--bebbeebeebbbbbbbebebebebbebbbebeebbbbbbeebebebee--bebbebeebbbbbbbebeb:    
Contact         :   b b                           b bb                                                               

queryA       543:DFDNASAL-TELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNI: 596
                :         * *  *  * *  *  *  *      * * *       * ** *  :
7drb_D_1     709:TGRIPAWIGTDLLNLRILSLRFNKFYGSISPIICQLQFLQ------ILDLSANGL: 757
SecStr          :ESB  HHHHHTT   SEEE  SS  BS   GGGGG SS  ------EEE  SS  :    
ExpBur          :ebebbebbbeebeebebbbbeebebeeeeeeebeebeeee------eeeeeebee:

Input Residue Numbers for Focused Sites

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