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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [939 aa] | TIR domain-containing protein :Q9N5Z3_CAEEL | |
2 | b | Q 1 (Q) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 293N 295S 296S 317D (identity: 100.0 %/26.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8suf_D_1 identity=26.5% |
queryA 285:NLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIK-------GSYPQHINISRN-FSKLLSLRA----L: 372 : * * ** ** * * ** * * ** * * * * * * ** : 8suf_D_1 175:SLPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTN---IEQFLRGIPAIRQISVAYNSIAELDLSLATPFLQQLDAEANRIVDLTSLPGTVVHV: 271 SecStr :H TT EEE S S TT SS EEE SS S --- HHHHTT TT EEE SS B TTT TT EEE SS B TT EE: ExpBur :bbeebeebbbbebebeeeebeeebebeebeebebbebebee---beebbeebebbeebbbbebebeebebeeebeebeebebeebebeebeebbeebeeb: Contact : b bb b queryA 373:HLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTR: 472 : * * * * * * * * ** * * * * * * * : 8suf_D_1 272:NLAGNALKRVPD----AVAELASLVALNVSRNEIEAGNSSVFSS-PELEMLDASYNKLDSLPVEWLQKC-----------EKRIAHLHLE-HNSIEQLTG: 354 SecStr :E TTS S H----HHHT SS EEE SS BSSS -S EEE SSB SS TTSGGG -----------TTT EEE -SS T: ExpBur :bbbebebeebbe----bbbebeebebbbbbebebebeebeebeb-eebeebbbbebebeebbeebbeeb-----------eeebbebbbb-ebebeebee: queryA 473:PLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAG: 572 : * **** * * * ** ** * * *** * * * * *** * *** : 8suf_D_1 355:GVLAN--ATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNS-LELLEPSSLSGL-KLESLDLSHNKLT-EVPAAIGKVEQLKKVDLSHN----RIAK: 445 SecStr :TSSTT-- SS EEE SS SEE SSSS TT EEE SS - EE TTTTTT - SEEE S S-S GGGGS S SEEE TTS---- : ExpBur :ebbee--beebebbbbbbbebeebeeebbbeebebeebebbebe-beebeeebbeeb-ebebbbbbebebe-eebebbeebeebeebbbbeb----ebee: queryA 573:VTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHIN: 672 :* * ** * * * * * * * * * * * * * * * : 8suf_D_1 446:VYQYV--LNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKD-------AFARCPKLRKISMKMNKIKSL--DEGLTEASGLRRLDVS: 534 SecStr : SST--TTS TT EEE SS B TTTTTT TT EEE SS B TT-------TT S TT EEE SS B --TTTTTT TT EEE : ExpBur :beeee--bbeeeebeebbbbebebeebbeebbbebeebebbebbebebeebeee-------bbbebeebeebbbeebebeeb--eebbeebebbeebbbb: queryA 673:DNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTD-SLSDFTS----------------------SLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLK: 749 : * * * ** * * ** * * * ** * * ** * * * * * * *** : 8suf_D_1 535:HNEILVLKWSALPE--NLEILNADNNDINLLTAASMSPSTANLKSVSLSNNGITIMNADQIPNSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLT: 632 SecStr :SS B GGGS S--S SEEE TT SSSSSTTTT B SS EE STTS TT SEEE TTS EE TTTTTS TT EEE TT : ExpBur :ebebeebebebbbb--bbbebebeebebeebeebeebebeeebeebbbbebbbeebebebbbeebeebebbebebeebbeebbbebeebeebbbebbebe: queryA 750:TINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWM: 787 : * ** * * * **: 8suf_D_1 633:VVATESMKVVEAVHPLKVEISENPLICDCQMG----WM: 666 SecStr : GGGT TT SS EEE SS TT G----GG: ExpBur :ebbeebbebeeeeeebebebbebebebbbebe----bb: |