CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD:![]() ![]() ![]()
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | P 1 (P) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 558V 560D 562S 588V 590N 612E 614V (identity: 100.0 %/95.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3w3l_D_1 identity=95.3% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130 :********************************************************************** ******************: 3w3l_D_1 9:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108 SecStr : SSEEEEETTEEEEE TTS SS TT TT SEEE SS EE TTSSTT SS EEE S S ------------ EE TTTTTT SS EE: ExpBur :ebeebbeeeeeeeeebbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebbee------------ebebeebbbeebeebeeb: queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230 :****************************************************************************************************: 3w3l_D_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208 SecStr :E TTS SS SS TT SEEE SS EE TTTTTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS SS TT SEEE T: ExpBur :bbbebebeebbeebbebbbbbbbbbbebbebeeebbbebeebeebebbbbbbeeeebeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebb: queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330 :****************************************************************************************************: 3w3l_D_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308 SecStr :TS EE SSTTTT SS SEEE TTSS TT SS SGGG EE TTTTTT S EEE TTS S GGGSTT TT EEE SS HHHHHS : ExpBur :bbebeebbeeebeebeebbbbbbbbbbbbbeeeebeeeebeebeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeeb: queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430 :****************************************************************************************************: 3w3l_D_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408 SecStr :GGGGG TT EEE S TT SS GGGGG S EEE S SEE GGGGGGGTT TT EEE SS EE GGGGTTSSS EEE SS : ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebeb: queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530 :*** ************************************************************************: 3w3l_D_1 409:SPLXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508 SecStr : ------------------------- S TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE TTS S TTTTST: ExpBur :eee-------------------------eeeeeeeebbeeeeebbeeebeeeeebbbbbebebeebeeebbeebbebbbbbbbebebebebebebbeebe: Contact : b b queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630 :****************************************************************************************************: 3w3l_D_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608 SecStr :T EEE SS TTTTTT TT EEE TT HHHHT TTS GGGGG SS EEE TTS SS EESS EEE SS HHHHT TT T: ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebbbebbbeeeebebebbeebbbbbbbbeebbeeeeee: Contact : b b b b b b b b queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730 :****************************************************************************************************: 3w3l_D_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708 SecStr :TTTTTTEETT EEE SS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S HHHH S EEE SS TT: ExpBur :bbebbebbeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbee: queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 :****************************************************************************************: 3w3l_D_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796 SecStr :SSTT S EEE SS TTTS SS EEE TT EEE SGGGHHHHHHHHH SSB GGGSEEEESGGGTT BTTS : ExpBur :bbeebebbeebbbbebebebbeeebbebeeeeebeebbbbebebebeeebbebeebbeeeeebebeebbbbebeeeeebeeebbbeee: |