CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD:![]() ![]() ![]()
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [708 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | N 1 (N) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 226K 228F 230S 250L 252D 254S 291Y 293N 462D 464H 465S 466N 467F 468Y (identity: 100.0 %/90.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6wml_D_1 identity=90.4% |
queryA 33:SYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLL: 132 :******* ****************** *************** *********** ********************: 6wml_D_1 11:SYPCDEKXXXXXXIAECSNRRLQEVPQTVGKXXTELDLSDNFITHITNXXXXXXXXLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLRELLL: 110 SecStr : SSEE ------ EE TTS SS S -- EEE TTS EE -------- EEE TT ------------- EE TTTTTT TT EEE : ExpBur :eebbeee------eeebeebebeeeeeeeee--ebeebbebebeeeee--------eebeebbebee-------------ebeeeeeeeeeeeebbbbbe: queryA 133:EDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 232 :******************************* *******************************************************************: 6wml_D_1 111:EDNQLPQIPSGLPESLTELSLIQNNIYNITKXXISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 210 SecStr : SS SS SS S SEEE TTS EE -- TT SEEE SSS TT EE TTTTTT TT EEE SS SS SS TT EEE TTS: ExpBur :bbbebeebeeeebeebebebbbbbebeebee--ebebeebbebebbbbbbeeeeeeebeeeeebbbebeebbbbbbbbbbbeebbeebbebbeebebbbb: Contact : b b b queryA 233:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 332 :****************************************************************************************************: 6wml_D_1 211:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 310 SecStr : EE TTSSSS TT EEE TTSS TT SS TTT EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS GG: ExpBur :ebeebbeeebbebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebbebbbeebeebebbbbbebebbebbeebeb: Contact : b b b b b queryA 333:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 432 :****************************************************************************************************: 6wml_D_1 311:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 410 SecStr :GGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGGGGTT SS EEE SS EE GGGGTS SS EEE SS : ExpBur :beebeebeebbbbbbbeeeeeeeebebbeebeebebbebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebebee: queryA 433:LVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 532 :* **************************************************************************: 6wml_D_1 411:LXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 510 SecStr : ------------------------- S TTS SSS S SS HHHHTTS EEE SS S TTSSTT SEEE TTS S TTSSSTT : ExpBur :e-------------------------eebeeeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebeeb: Contact : b bbbbb queryA 533:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 632 :****************************************************************************************************: 6wml_D_1 511:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 610 SecStr : EEE SS TTTTTT TT EEE S HHHHS TTS GGGGG SS EEE TTS SS BSS EEE TTS HHHHT TT TTT: ExpBur :ebbbbbebebebeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebeebbeeeebebebbeebbbbbbbbeebbeeeeeebb: queryA 633:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFL: 732 :************************************************************************************************* : 6wml_D_1 611:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSXXX: 710 SecStr :TTTTTBTT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT S EEE SS ---: ExpBur :ebbeebeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeeeeeebeebbebbbbbbbbebebeeeee---: queryA 733:SEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIV: 815 : ********************* *********************** **************** *******: 6wml_D_1 711:XXVSSLKHLDLSSNLLKTINKSAXXXXXXXKLSMLELHGNPFECTCDIGDFRRXXXXXLNVKIPRLVDVICASPXXQRGKSIV: 793 SecStr :-- S EEE TTS TT ------- EEE TT EE STTHHHHH ----- SB S TTTSBEEES--STTSB : ExpBur :--eeebbebbbbebebeeeeeee-------eeeeebbeebebbeeeebeeeee-----eeeeeebbbebbbeee--eeeebee: |