Protein Model on 5awc_D_1_C_1
(TEMPLATE: 
5awc
)Protein Model on 5awc_D_1_C_1
(TEMPLATE: 5awc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [724 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [727 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 348Y 403I 405F 427E 429R 431S 460E 490L 491N 492S 494F 514A 516S 518A 541R 543D 566H 567Y 570I 571A 572G 573V 574T 598T 600T 601D 622I 627D 628D 629N 630R 652K 653H (identity: 100.0 %/92.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5awc_D_1 identity=92.5% |
queryA 33:SYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLL: 132
:****** *********************************** ************** ********************:
5awc_D_1 11:SYPCDEXXXXXXXXAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNEXXXXXQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLRELLL: 110
SecStr : SSB -------- B SS SS SS S EE S EE ----- EEEES S ------------ EE TTSSTT TT EEEE:
ExpBur :eebbbe--------eebbebebeebbeeeeeebeebebbebebeebeee-----eebbbbbbbebeee------------ebebeeebbeeeeebeebbb:
queryA 133:EDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 232
:****************************************************************************************************:
5awc_D_1 111:EDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 210
SecStr :ESS SS S TT EEE S SHHHHT TT SEEE SSS TT TTSGGGT EEE SS S SS TT EEE SS:
ExpBur :bebebeebbeebbebbbbbbbbebebebbbeebbeebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbbb:
Contact : bbbb
queryA 233:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 332
:****************************************************************************************************:
5awc_D_1 211:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 310
SecStr : EE GGGGSS TT EEE SSS TT SS GGG EE TTSSSS TT EEE SS GGGTTT S EEE SS THHHHHS GG:
ExpBur :ebeebeeebbeebeebbbbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeebeb:
Contact : bbbbbb
queryA 333:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 432
:****************************************************************************************************:
5awc_D_1 311:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 410
SecStr :GGG TT EEE TT SS TTTTS TT EEE TT SEE GGGGTTTTT TT EEE SS EE GGGGTSSS EEE SS :
ExpBur :beebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebebee:
Contact : b b b b b b b
queryA 433:LVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 532
: *************************************************************************:
5awc_D_1 411:XXXXXXXXXXXXXXXXXXXXXXXXXXXEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 510
SecStr :--------------------------- TTS SSS S SS HHHHTTSEEEE SS S TTTTTT EEEEE TTS S TTTTSTT :
ExpBur :---------------------------eeeeeeebbbeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebeeb:
Contact : b bbb b b b b
queryA 533:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 632
:****************************************************************************************************:
5awc_D_1 511:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 610
SecStr : EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS EESS EEE SS HHHHT TT TTT:
ExpBur :ebbbbbebebebeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebeebeeeeebebebbeebbbbbbbbeebbeeebeebb:
Contact : b b bb bbbbb b bb b bbbb
queryA 633:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFL: 732
:****************************************************************************************************:
5awc_D_1 611:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFL: 710
SecStr :TTTTEETT EEE TTS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS TTGGGT S EEE SS SS T:
ExpBur :ebbeebeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbebbebeebbeebeebbebbebbbbbebebeebbeebe:
Contact : bb
queryA 733:SEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIV: 815
:********************** ******************************************************:
5awc_D_1 711:SEVSSLKHLDLSSNLLKTINKSXXXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIV: 793
SecStr :TT SS EEE SS S ------- EEE TT SSSTHHHHHHHHH TTSB TTTSB SSSSTT B :
ExpBur :eebeebeebbbbebebeebeee-------eebeebbbbebebeeeeebeebeebbeeeeebebbebbbbebeeeeeeeeebbe:
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[assembly_id:2]
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