[pdbjlvh2]Protein Model on 1ook_D_1_B

Protein Model on 1ook_D_1_B_1 (TEMPLATE: 1ook )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	D 1 (G)	polymer(polypeptide(L)) [284 aa]	Platelet glycoprotein Ib alpha chain precursor :GPBA_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [259 aa]	Human Alpha Thrombin :THRB_HUMAN	715R(E) 716T(K) 736S(E) 737S(N) 739K(D) 758T(S) 759K(H) 760T(L) 765S(P) 785R 789E(D) 790H(N) (identity: 8.3 %/35.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1ook_D_1 identity=35.6%

queryA       569:RIAGVTHHLEF---IQNFTNLK--------VLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNE: 657
                :    *  ***      * * *          * ** *  **           *  *      *  *  *           *  *  **** * *   *  :
1ook_D_1       5:EVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGT---------LPVLGTLDLSHNQLQSLPLL:  95
SecStr          :EEEEETTEEEEE TTS  SS  S   TTEEEEE TTS  SEEEGGGGSS TT  EEE TTS  SEEE  S --------- TT  EEE  SS  SS    :    
ExpBur          :ebeeeeeebebebeeeebeeebeebeeebbbbbbbebebeebbbeebeebeebeebbbbebebeebeeebe---------beebbebbbbebebeebbeb:    

queryA       658:AFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALE: 757
                :    *** ** *    * *       *     *  * * ** *  *   *   *  *  * *  *    ** * *     *  * *  * * ** *    :
1ook_D_1      96:G-QTLPA-LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFG: 193
SecStr          :T-TT TT-  EEE  SS  SS  TTTTTT TT  EEE TTS      TTTTTT TT  EEE  SS  S   TTTTSS TT  EEE  SS      TTSST:    
ExpBur          :b-ebbee-bebbebbebebeebeeebbeebeebebbebbebebeebbeebbeebeebeebbbbebebeebbeebbeebeebebbbbbebebeebeeebbe:    
Contact         :                                                         bb                   bb b                  

queryA       758:TKTTTKLSMLELHGNPFECTCDIGDFRRWMDEH: 790
                :      *    *****  * * *  ****    :
1ook_D_1     194:SHL---LPFAFLHGNPWLCNCEILYFRRWLQDN: 223
SecStr          :T  --- SEEE  SS B  SSTTHHHHHHHHHT:    
ExpBur          :eee---beebbbbbbebebeeebbbbbbbbeeb:    
Contact         :bbb    b                   b   bb

Protein Model on 1ook_D_1_B_1 (TEMPLATE: 1ook )

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