Protein Model on 3w3l_D_1_A_1
(TEMPLATE: 
3w3l
)Protein Model on 3w3l_D_1_A_1
(TEMPLATE: 3w3l
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 403I 405F 427E 459F 460E 490L 491N 494F 514A 516S 541R 566H 567Y 570I 571A 572G 573V 574T 600T 601D 622I 625N 627D 628D 629N 630R (identity: 100.0 %/95.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3w3l_D_1 identity=95.3% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:********************************************************************** ******************:
3w3l_D_1 9:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSEEEEETTEEEEE TTS SS TT TT SEEE SS EE TTSSTT SS EEE S S ------------ EE TTTTTT SS EE:
ExpBur :ebeebbeeeeeeeeebbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebbee------------ebebeebbbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
3w3l_D_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E TTS SS SS TT SEEE SS EE TTTTTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS SS TT SEEE T:
ExpBur :bbbebebeebbeebbebbbbbbbbbbebbebeeebbbebeebeebebbbbbbeeeebeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
3w3l_D_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE SSTTTT SS SEEE TTSS TT SS SGGG EE TTTTTT S EEE TTS S GGGSTT TT EEE SS HHHHHS :
ExpBur :bbebeebbeeebeebeebbbbbbbbbbbbbeeeebeeeebeebeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
3w3l_D_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE S TT SS GGGGG S EEE S SEE GGGGGGGTT TT EEE SS EE GGGGTTSSS EEE SS :
ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebeb:
Contact : b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:*** ************************************************************************:
3w3l_D_1 409:SPLXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ------------------------- S TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE TTS S TTTTST:
ExpBur :eee-------------------------eeeeeeeebbeeeeebbeeebeeeeebbbbbebebeebeeebbeebbebbbbbbbebebebebebebbeebe:
Contact : bb bb b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
3w3l_D_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T EEE SS TTTTTT TT EEE TT HHHHT TTS GGGGG SS EEE TTS SS EESS EEE SS HHHHT TT T:
ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebbbebbbeeeebebebbeebbbbbbbbeebbeeeeee:
Contact : b bb bbbbb bb b b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
3w3l_D_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTEETT EEE SS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S HHHH S EEE SS TT:
ExpBur :bbebbebbeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbee:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:****************************************************************************************:
3w3l_D_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr :SSTT S EEE SS TTTS SS EEE TT EEE SGGGHHHHHHHHH SSB GGGSEEEESGGGTT BTTS :
ExpBur :bbeebebbeebbbbebebebbeeebbebeeeeebeebbbbebebebeeebbebeebbeeeeebebeebbbbebeeeeebeeebbbeee:
|
[assembly_id:1]
[help]