Protein Model on 5az5_C_1_M_1
(TEMPLATE: 
5az5
)Protein Model on 5az5_C_1_M_1
(TEMPLATE: 5az5
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [748 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | M 1 (M) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 558V 560D 562S 588V 590N 612E 614V (identity: 100.0 %/95.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5az5_C_1 identity=95.0% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:*********** ********************************************************* *******************:
5az5_C_1 9:SRSYPCDEKKQXXSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLREL: 108
SecStr : SSSEEEE -- EEEE TTS SS TT TT SEEE TTS EE TTTTTT TT EEE TT S ----------- EE TTTT S TT EE:
ExpBur :ebeebbeeeee--eebbebeebebeebbeebeeebbebebbebebeebeeeebeebeebbebbbbebeee-----------eebebeebbbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
5az5_C_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E TTS SS S TT SEEE TTS EE HHHHTT TT SEEE SSS TT S EE TTTTTT TT EEE SS SS S TT SEEE T:
ExpBur :bbbebebeebbeebbebbbbbbbbbbebbebbeebbbebeebebbebbbbbbeeeeeeebebeeebbeebeebebbbbbbbbbeebbeebbebbeebebb:
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
5az5_C_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE SSTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS THHHHHS :
ExpBur :bbebeebbeeebeebeebebbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeeb:
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
5az5_C_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGGGGTT SS EEE S EE GGGGGS S EEE SS :
ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb:
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:** ************************************************************************:
5az5_C_1 409:SPXXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : -------------------------- S TTS SSS S SS HHHHTTS EEE TTS SS TTTTTT SEEE TTS S TTTTST:
ExpBur :ee--------------------------eeeeeeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact : b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
5az5_C_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T SEEE TTS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TTS SS EESS EEE TTS HHHHT TT T:
ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebbbebbeeeeebebebbeebbbbbbbbeebbeeebee:
Contact : b b b b b b b b
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
5az5_C_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS TTHHHH S EEE SS TT:
ExpBur :bbebbeebeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbee:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817
:***************************************************************************************:
5az5_C_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795
SecStr : SSS TT SEEE SS S TT SS EEE TT EEE SGGGHHHHHHHHH TTSB GGGSEEEESTTTTTSBSS :
ExpBur :bbbebebbeebbbbebebeebeeebbeeeeebebeebbbbebebebeeebbebeebbeebeebebeebbebebeeeeeeeeebbeee:
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[assembly_id:2]
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