Protein Model on 3w3l_C_1_IA_1 (TEMPLATE: 3w3l )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) C 1 (C) polymer(polypeptide(L)) [751 aa] Toll-like receptor 8 :TLR8_HUMAN
2 b IA 1 (C) non-polymer(SO4) SULFATE ION 677K 699K 723R (identity: 100.0 %/95.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3w3l_C_1 identity=95.3%
queryA        31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
                :**********************************************************************            ******************:
3w3l_C_1       9:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr          :    SSEEEEETTEEEEE TTS  SS  S   TT SEEE  SS   EE TTSSTT SS  EEE  S S  ------------  EE TTSSTT SS  EE:    
ExpBur          :ebeebbeeeeeeeeebbebbebebeebbeebbeebbebebbebebeebeeebbeebeebeebbbbebbee------------ebebeeebbeebeebeeb:    

queryA       131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
                :****************************************************************************************************:
3w3l_C_1     109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr          :E TTS  SS  SS  TT SEEE  SS   EE TTTTTT TT SEEE TTSS TT      EE TTSSTT TT  EEE  SS  SS  SS  TT SEEE T:    
ExpBur          :bbbebebeebbeebbeebbebbbbbbebbebeeebbbebeebebbebbbbbbeeeeeeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:    

queryA       231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
                :****************************************************************************************************:
3w3l_C_1     209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr          :TS   EE SSSSTT S  SEEE TTSS   TT SS     GGG   EE TTTTTT  S  EEE TTS  S   GGGGTT TT  EEE  SS  HHHHHS :    
ExpBur          :bbebeebeeeebeebeebbbbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebebbeebeebebbbbbebebbebbeeb:    

queryA       331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
                :****************************************************************************************************:
3w3l_C_1     309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr          :GGGGG TT  EEE TT   TT   SS    GGGGG TT  EEE  S   SEE GGGGGGGTT TT  EEE  SS   EE GGGGTS SS  EEE  SS  :    
ExpBur          :ebbeebeebbebbbbbbbeeeeeeeebebbeebeebebbebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebeb:    

queryA       431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
                :***                         ************************************************************************:
3w3l_C_1     409:SPLXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr          :   -------------------------  S TTS SSS  S SS HHHHTTS EEE  SS   S  TTTTTT    SEEE TTS       S TTTTST:    
ExpBur          :eee-------------------------eebebeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:    

queryA       531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
                :****************************************************************************************************:
3w3l_C_1     509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr          :T SEEE  SS      TTTTTT TT  EEE TT HHHHT TTS    GGGGG SS  EEE TTS     SS     BSS  EEE  SS HHHHT TT  T:    
ExpBur          :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebebbebebebbbeeeebebebbeebbbbbbbbeebbeeebee:    

queryA       631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
                :****************************************************************************************************:
3w3l_C_1     609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr          :TTTTTTTBTT  EEE TTS  S   HHHHHTS TT SEEE  SS  S   GGGGGG TT  EEE  SS      S HHHH SS  EEE  SS      TT:    
ExpBur          :bbebbeebeebeebbbbebebeebeeebbebbbeebeebbbbebebeebebebbeebeebebbbbeebebeebbeebbebbebbebbbbbebebeebbee:    
Contact         :                                              b                     b                       b       

queryA       731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
                :****************************************************************************************:
3w3l_C_1     709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr          :SSTT  S  EEE  SS      HHHH  SS     EEE TT  EE SGGGHHHHHHHHH  SSB   GGGSBEEESTTTTTSBTTS  :    
ExpBur          :bbeebebbebbbbbebebeebeebbbeeeeeeebeebebbebebebeeebbebeebbeeeeebebeebbebebeeeeeeeeebbbeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123