Protein Model on 4r07_C_1_FA_1
(TEMPLATE: 
4r07
)Protein Model on 4r07_C_1_FA_1
(TEMPLATE: 4r07
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [738 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | FA 1 (C) | non-polymer(UCG) | 3'-O-[(R)-{[(2R,3aR,4R,6R,6aR)-6-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-2-hydroxy-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]methoxy}(hydroxy)phosphoryl]uridine 5'-(dihydrogen phosphate) | 314K 315V 340E 341I 343D 370R 373H 375R 400N 469H 470F 471T 472R 473P 474L (identity: 100.0 %/93.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4r07_C_1 identity=93.8% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
:******** ******************************************************** *******************:
4r07_C_1 10:RSYPCDEKXXXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLRELL: 109
SecStr : SSEE ----- EEE SS SS S TT EEE TTS EE TTTTTT TT EEE TTTT ------------ EE TTTTTT SS EEE:
ExpBur :eeebbbbe-----eebebeebebeebbeebeeebeebebbebebeebeeebbeebeebeebbbbebeee------------ebebeebbbeebeebebbb:
queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
:****************************************************************************************************:
4r07_C_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr : SS SS SS TT SEEE TTS EE HHHHTT TT EEE SSS TT EE TTTTTT TT EEE SS SS S TT SEEE TT:
ExpBur :bbebebeebbeebbebbbebbbbbbebeebbeebbbebeebebbebbbbbbeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:
queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
:****************************************************************************************************:
4r07_C_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr :S EE TTTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS G:
ExpBur :bebeebbeeebeebeebbbbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbebebeebbeebe:
Contact : bb
queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
:****************************************************************************************************:
4r07_C_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr :GGGG TT EEE S TT SS GGGGG TT EEE TT SEE GGGGGGGTT TT EEE SS EE GGGGGG SS EEE SS :
ExpBur :bbeebeebeebbbbebbeeeeeeeebebbeebeebeebebbbbbbbbbeebebebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebebe:
Contact : bb b b b b b
queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
:* **************************************************************************:
4r07_C_1 410:PXXXXXXXXXXXXXXXXXXXXXXXXXDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr : ------------------------- SS TTS SSS S SS HHHHTTS EEE TTS S TTTTTT SEEE TTS S TTTTSTT:
ExpBur :e-------------------------eeebebeeebbeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:
Contact : bbbbbb
queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
:****************************************************************************************************:
4r07_C_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr : EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TTS SS EESS EEE TTS HHHHT TT TT:
ExpBur :bebbbbbebebebeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebbbeebbeeeebebebbeebbbbbbebeebbeeeeeeb:
queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
:****************************************************************************************************:
4r07_C_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr :TTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S HHHH S EEE SS TTT:
ExpBur :bebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebeeeb:
queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:********************* ***********************************************************:
4r07_C_1 710:LSEVSSLKHLDLSSNLLKTINXXXXXXXTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr :TTT SS EEE TTS S ------- EEE TT EE SGGGHHHHHHHHH TTSB GGGSBEEESTTTTTSBTTS :
ExpBur :eeebebbeebbbbebebebbe-------eeeebebbbbeebebebeeebbebbeebeeeeebebbebbebebeeeeebeeebbeeee:
|
[assembly_id:2]
[help]