Protein Model on 6wml_C_1_D_1
(TEMPLATE: 
6wml
)Protein Model on 6wml_C_1_D_1
(TEMPLATE: 6wml
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [681 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [708 aa] | Toll-like receptor 8 :TLR8_HUMAN | 100V 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 403I 405F 427E 429R 459F 460E 490L 491N 492S 494F 514A 516S 518A 541R 543D 566H 567Y 570I 571A 572G 573V 574T 600T 601D 622I 627D 628D 629N 630R (identity: 100.0 %/88.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6wml_C_1 identity=88.2% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:********************************************************************** ******************:
6wml_C_1 9:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSEEE SS EEE SS SS TTS TT SEEE SS EE SSSS S S EEE S S ------------ EE TTTTTT TT EE:
ExpBur :eeeebbeeeeeeeebbbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebeee------------ebebeebbbeebeebebb:
Contact : b
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
6wml_C_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E SS SS SS TT SEEE SS EE HHHHTT TT EEE SSS TT EE TTTTTT TT EEE SS SS SS TT EEE T:
ExpBur :bbbebebeebbeebbebbeebbbbbbebbebbeebbbebeebebbebbbbbbeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
6wml_C_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE GGGGTT TT EEE TTSS TT SS GGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHH :
ExpBur :bbebeebbeeebeebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
6wml_C_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE S TT SS GGGGG TT EEE TT SEE GGGGGGGTT TT EEE SS EE GGGGTTSS EEE SS :
ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbebbeebeebebbbbbbbbbeebeeebbebbbebeebbbbbbbebebeebebebbeebeebebbbbbebeb:
Contact : b b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:*** ************************************************************************:
6wml_C_1 409:SPLXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ------------------------- S TTS SSS S SS HHHHTTSEEEE SS S TTTTTT EEEEE TTS S TTTTST:
ExpBur :eee-------------------------eebebeeebbbeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact : bb bbb b b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
6wml_C_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS EESS EEE TTS HHHHT TT T:
ExpBur :ebebbbbbebebebeeeebbebbeebbbbbbbebbeebeeeeeebbbebbeebeebeebebbebbbebbbeeeebebebbeebbbbbbbbeebbeeeeee:
Contact : b b bb bbbbb bb b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:************************************************************************** **************** :
6wml_C_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTXXXXXXXSSLRTLLLSHNRISHLXXX: 708
SecStr :TTTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS ------- EEE S ---:
ExpBur :bbebbebbeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebebeeebeebebbbbeebebeeee-------eeebeebbbebbbeee---:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVI: 802
: ********* ********* **********:
6wml_C_1 709:XXXXXXXLKHLDLSSNXXXXXXXXXXXXXXXXXLSMLELHGNXXXXXXXXXXXXXXXXXXXXVKIPRLVDVI: 780
SecStr :------- EEE ----------------- EEE TT -------------------- B GGG :
ExpBur :-------eeeebebee-----------------eebebebee--------------------eeeebebbee:
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[assembly_id:2]
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