Protein Model on 4r07_B_1_Y_1
(TEMPLATE: 
4r07
)Protein Model on 4r07_B_1_Y_1
(TEMPLATE: 4r07
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [738 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | Y 1 (B) | non-polymer(UCG) | 3'-O-[(R)-{[(2R,3aR,4R,6R,6aR)-6-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-2-hydroxy-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]methoxy}(hydroxy)phosphoryl]uridine 5'-(dihydrogen phosphate) | 314K 315V 340E 341I 343D 370R 373H 375R 400N 469H 470F 471T 472R 473P 474L (identity: 100.0 %/93.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4r07_B_1 identity=93.8% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
:******** ******************************************************** ********************:
4r07_B_1 10:RSYPCDEKXXXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109
SecStr : SSEE ----- EEE SS SS S S TT SEEE TTS EE TTTTTT SS EEE TT S ----------- EE TTTTTT TT EEE:
ExpBur :eeebbeee-----eebebeebebeebbeebbeebeebebbebebeebeeebbeebeebeebbbbebeee-----------eebebeebbbeebeebeebb:
queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
:****************************************************************************************************:
4r07_B_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr : SS SS S TT SEEE TTS EE HHHHTT TT SEEE SSS TT EE TTSSTT TT EEE SS SS S TT SEEE TT:
ExpBur :bbebebeebbeebbebbeebbbbbbebbebbeebbbebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:
queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
:****************************************************************************************************:
4r07_B_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr :S EE TTTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS G:
ExpBur :bebeebbeebbeebeebebbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebebbeebeebebbbbbebebbebbeebe:
Contact : bb
queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
:****************************************************************************************************:
4r07_B_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr :GGGS TT EEE S TT SB GGGGG TT EEE TT SEE GGGGGGGTT TT EEE SS EE THHHHTSSS EEE SS :
ExpBur :bbeebeebeebbbbebbeeeeeeeebebbeebeebeebebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebebe:
Contact : bb b b b b b
queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
:* **************************************************************************:
4r07_B_1 410:PXXXXXXXXXXXXXXXXXXXXXXXXXDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr : ------------------------- SS TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE TTS S TTTTSTT:
ExpBur :e-------------------------eeebebeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:
Contact : bbbbbb
queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
:****************************************************************************************************:
4r07_B_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr : EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS BSS EEE TTS HHHHT TT TT:
ExpBur :bebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebbbebbbeeeebebebbeebbbbbbbbeebbeeeeeeb:
queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
:****************************************************************************************************:
4r07_B_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr :TTTTTTBTT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S HHHH S EEE SS TTS:
ExpBur :bebbebbeebeebbbbebebeebeeebbebbbebbeebbbbebebeebebebbeebeebeebbbebbebeebbeebeebbebbebbbbbebebeebeeeb:
queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:********************** *********************************************************:
4r07_B_1 710:LSEVSSLKHLDLSSNLLKTINKXXXXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr :TTS SS EEE SS S -------- EEE TT EE SGGGHHHHHHHHHTTTSB GGGSBEEESTTTTTSBTT :
ExpBur :beeeebbeebbbbebebebbee--------eebeebbbbebebebeeebbebbebbeeeeebebeebbbbebbeeeebeeebbeeee:
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[assembly_id:1]
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