Protein Model on 3w3n_B_1_W_1 (TEMPLATE: 3w3n )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) B 1 (B) polymer(polypeptide(L)) [749 aa] Toll-like receptor 8 :TLR8_HUMAN
2 b W 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 77H 79T 115N 117T (identity: 100.0 %/95.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3w3n_B_1 identity=95.3%
queryA        32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
                :*********************************************************************            *******************:
3w3n_B_1      10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLRELL: 109
SecStr          :  SSSEEEE SS EEEE  SS  SS  S   TT  EEE  SS   EE TTTSTT    SEEE  S S  ------------  EE TTTTTT SS  EEE:    
ExpBur          :eeebbebeeeeeebebebeebebeebbeebbeebbebebbebebeebeeebbeebeebeebbbbebeee------------ebebeebbbeebeebeebb:    
Contact         :                                             b b                                   b b              

queryA       132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
                :****************************************************************************************************:
3w3n_B_1     110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr          :  SS  SS  TT  TT SEEE  SS   EE HHHHTT TT SEEE  SSS TT      EE TTTTTT TT  EEE  SS  SS  S   TT SEEE TT:    
ExpBur          :bbebebeebbebbbebbbbbbbbbbebbebbeebbbebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:    

queryA       232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
                :****************************************************************************************************:
3w3n_B_1     210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr          :S   EE SSTTTT TT  EEE TTSS   TT SS     GGG   EE TTTTTT TT  EEE TTS  S   GGGGTT TT  EEE TTS  HHHHHS G:    
ExpBur          :bebeebbeeebeebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbebebbebbeebe:    

queryA       332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
                :****************************************************************************************************:
3w3n_B_1     310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr          :GGGG TT  EEE  S   TT   SB    GGGGG TT  EEE TT   SEE GGGGHHHHT TT  EEE  SS   EE GGGGGS SS  EEE  SS   :    
ExpBur          :bbeebeebeebbbbbbbeeeeeeeebebbeebbebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebebe:    

queryA       432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
                :**                         *************************************************************************:
3w3n_B_1     410:PLXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr          :  -------------------------  S TTS SSS  S SS HHHHTTS EEE  SS   S  TTTTTT    SEEE TTS       S TTTTSTT:    
ExpBur          :be-------------------------eebebeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:    

queryA       532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
                :****************************************************************************************************:
3w3n_B_1     510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr          :  EEE  SS      TTTTTT TT  EEE  S HHHHT TTS    GGGGG SS  EEE TT      SS     BSS  EEE TTS HHHHT TT  TT:    
ExpBur          :bebbbbbebebbbeeeebbbbbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebebbebebeebbeeeebebebbeebbbbbbbbeebbeeebeeb:    

queryA       632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
                :****************************************************************************************************:
3w3n_B_1     610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr          :TTTTTTBTT  EEE  SS  S   HHHHHTS TT SEEE  SS  S   GGGGGG TT  EEE  SS      S STTT S   EEE  SS      TTH:    
ExpBur          :bebbeebeebeebbbbebebeebeeebbebbbeebeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbebb:    

queryA       732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817
                :**************************************************************************************:
3w3n_B_1     710:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795
SecStr          :HHH TT  EEE  SS  S   GGGG  SS     EEE TT  EE STTTHHHHHHHHH  SSB   TTSSBEEESTTTTTSBTT  :    
ExpBur          :bbebebbeebbbbebebebbeeebbeeeeebebeebbbbebebebeeebeebeebbeebeebebbebbebebeeeeebeeebbeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123