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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [768 aa] | Toll-like receptor 7 :G8E2R2_MACMU | |
2 | b | P 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 478Q(S) 479C 489S 490L(K) 511N 534Y 536D (identity: 71.4 %/41.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8s9h_B_1 identity=41.3% |
queryA 30:FSRSYPCDEK--KQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNL: 127 :* *** ** * * * * * * * * * * ** * * * * * * * * *: 8s9h_B_1 8:FPKTLPCDVTLDVSKNHVIVDCTDKHLTEIPGGIPTNTTNLTLTINHIPDISPASFHRLVHLVEIDFRCNCVPIRLGSKSNMCPRRLQIKPRSFSGLTYL: 107 SecStr :S SSEEEEETTTTEEEEE TT SS S TTEEEEE S EE TTTTSS TT SEEE SSS TTTS STT SS EE TTSSTT TT : ExpBur :eeeebebeeeeeeeeeebebebeebebeeebeebeeebbbbbbbebebeebbeebbeebeebeebbbbbbbebeebbeeeeebeeebeeeeebbeebeeb: queryA 128:RELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRK: 226 : * * *** ** *** ** *** *** * ** * * *** *** * ** * ** * *** * ** *** * : 8s9h_B_1 108:KSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKEQLTELANIEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTE: 207 SecStr : EEE SS SS S TT EEE SSS EE TTTTGGGTT EEE SSSBTTB SS BEE TTTTTT TT EEE SS B S SS TT SE: ExpBur :bbbbbbbbbbeebbeebbeebebbbbbbbbbeebeeebbebbeebeebbbbbbbbeebebeeebeeeeebbeebeebbbbbbbbbebeebbeebbebbee: queryA 227:LFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGE: 326 :* * * * * * ** * * ********** ****** ** * ** ** * * * * ** **** * *** * * *: 8s9h_B_1 208:LYLYNNMIAEIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCTPCKNNSPLQIPVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAKE: 307 SecStr :EE SS B TTTTTT TT EEE SSS TT SS GGG B TTTTTT TT EEE SS S GGGGSS S EEE SSS HHH: ExpBur :bbbbbbebeebeeebbeebeebeebbbbbbbbbeeeeebeeeeeeeebbbebeeebbbebeebbbbbbbbbbbeebeeebbeebeebebbbbbbbebbeb: queryA 327:IASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLS: 426 :* ** ** * ****** * * * ** * ** * ***** ** ** * ** ** **** * * * * **: 8s9h_B_1 308:IGDAKFLHFLPNLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLS: 407 SecStr :HTT GGGGG TT EEE S TT EEE GGGGG TT EEE TT EEEE GGGGGGGTT TT EEE SS EE GGGGGG TT SEEE : ExpBur :bbebebbeebeebeebbbbbbbeeeeeeeebebbebbeebeebeebebebbbbeebeeebbebbbebeebebbbbbebebeebebbbbeebeebebbbbb: queryA 427:ENRISPLVKDTRQSYANSSSFQRHIRKRRSTD----FEFDPHSN-----FYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSN: 517 : * *** * * * ** **** ****** * * ***** * : 8s9h_B_1 408:VNKISPXXXXXXXXXXXXXXXXXXXXXXXXXXXLYYFRYDKYARSCXXXXXXXXXXXXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLI: 507 SecStr :S --------------------------- SSSS TT -------------- GGGS EEE S GGGGTT TT SEEE S : ExpBur :ebebee---------------------------eebbebbbeeeee--------------ebeeeeebbbbbebebeebeeeebeebebbbbbebbebeb: Contact : bb bb b queryA 518:AQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSG: 617 : * * * ** *** ***** * ** ***** * ***** * ** * * * * * * * * ** ** * * *: 8s9h_B_1 508:SQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR-TMESESLRTLEFRG: 606 SecStr : B S SSTT S EEE SS B STTTTTT TT EEE S HHHHSTT GGGGGG TT EEE TT S S- BSS EEE S: ExpBur :ebebebebbebbeebebbbbbebebbbeeeebbebbeebebbbbbebbebbeeeeeebbbebbeebeebeebbbbebebeebebe-ebebebbebbbbee: Contact : b b queryA 618:NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTL: 717 :* ** ** * **** ** * * ** * * * * * * * * * ** * * * ** *** * * ** ** *: 8s9h_B_1 607:NHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNL: 706 SecStr :S HHHHT TT SSTTTTTTBTT EEE SS SS TTTTTTS TT EEE SS GGGGGS TT EEE SS S STTT SS EE: ExpBur :bebbebbeeebeebbebbeebebbeebbbbebebeebbeebbebbbeebbebbbbebebeebebeebeebeebebbbbbebebeebbeebbebbeebbeb: queryA 718:LLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLV-DVICASPGDQRGKSIVS: 816 : * * * * ** * ****** * * * ** ** * * **** * * * * ** * ** * ** * * *: 8s9h_B_1 707:ILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAVWFVWWV-QHTEVTIPYLATDVTCVGPGAHKGQSVIS: 805 SecStr :E SS TTTTTT TT EEE SS TTTS HHHHTT SEEE S EE SGGGHHHHHHH-HT S TTHHHH BEEESGGGTT BSTT: ExpBur :ebeebebeebbeebbeebeebeebbbbebbbeebeeebbbeebbeebeebbbbebebebeeebebbbebb-bbbebebeeeeeebebebeeeeeeeebbe: queryA 817:LELTTC: 822 :* * **: 8s9h_B_1 806:LDLYTC: 811 SecStr : GGG: ExpBur :bebeee: |