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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [393 aa] | Variable lymphocyte receptor B, Toll-like receptor 9 chimera :Q4G1L2_EPTBU:TLR9_MOUSE:Q4G1L2_EPTBU | |
2 | b | N 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 656N(P) 678F 680N 682T 705D(N) (identity: 60.0 %/40.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4qdh_B_1 identity=40.1% |
queryA 486:LDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTN: 585 :* ** * * * * ** ** ** ** ** * * *** * ** ** * ******* * * * : 4qdh_B_1 64:LSLSRNNLVTIKPEMFVNLSRLQCLSLSHNSIAQAVNGSQFLPLTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFXXXXIGHNFSFVTHLSM: 163 SecStr :EE SS GGGGTT TT EEE SS B SS SSTT TT EEE SS B TTTTTT TT EEE S S ---- THHHH TT: ExpBur :bbbbebebeebeeebbeebeebeebbbbebebebebebebbeebeebeebebbebebbbbeeebbebbebbeebebbebeeee----ebeebebbeebee: queryA 586:LKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQ: 685 :* * * ** * * * * * * **** * * * * ** * **** * * *** ** * ** * ***** * : 4qdh_B_1 164:LQSLSLAHNDIHTRVSSH-LNSNSVRFLDFSGNGMGRMW-DEGGLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFNWTSLS: 261 SecStr : EEE TTS SSS S - EESS EEE TTS HHHHH-HSTTTTTTTTTEETT EEE TTS S HHHHHTS TT EEE TTS S GGGGG: ExpBur :beebbbbebebeeebeee-bebebbeebebbebbbbebb-eeeeebeebbeebeebeebbbbebebeebeeebbebbbeebeebbbeebebeebebebbe: Contact : b b b b queryA 686:QFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKS------------ALETK-----------TTT: 762 : * ** *** ** * ** * * * * * * ** ** * *** * ** * *: 4qdh_B_1 262:FLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSVVPAFFALAVELKEVNLSHNILKTVDRSWXXXXXXXLKELALDTNQLKSVPDGIFDXXT: 361 SecStr :G TT EEE TTS EE SS TT EEE SS EE TTSSTT TT EEE SS TT ------- EEE SS TTTT -- : ExpBur :ebeebeebbbbebebebbeeeebbeebebeebbbbebebeebeeebbeebeebeebebbebebeebeeeb-------eeebbbbebebeebeeeebe--e: Contact : b queryA 763:KLSMLELHGNPFECTCDIGDF-RRWMDE: 789 : * ** ** * * * ** : 4qdh_B_1 362:SLQKIWLHTNPWDCSCPRIDYLSRWLNK: 389 SecStr : EEE SS B HHHHHHHHHHHHH: ExpBur :ebeebebeebebebeeeebebbbebbee: |