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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [749 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | J 1 (J) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 560D 562S 588V 590N 612E 614V (identity: 100.0 %/95.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5az5_B_1 identity=95.2% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130 :************ ******************************************************** ******************: 5az5_B_1 9:SRSYPCDEKKQNXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108 SecStr : SSEEE -- EEE SS SS S SS EEE TTS EE TTTTTT TT EEE STT ------------ EE TTTTTT TT EE: ExpBur :ebeebbbeeeee--eebebeebebeebbeebbeebeebebbebebeebeeebbeebeebbbbbbbbbebe------------ebebeebbbeebeebeeb: queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230 :****************************************************************************************************: 5az5_B_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208 SecStr :E SS SS S TT SEEE TTS EE HHHHTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS S TT SEEE T: ExpBur :bbbbbebeebbeebbeebbbbbbbbbebbebeeebbbebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb: queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330 :****************************************************************************************************: 5az5_B_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308 SecStr :TS EE TTTTTT TT EEE TTSS TT SS GGG EE TTTTTT TT EEE SS S GGGGTT TT EEE SS HHHHHH : ExpBur :bbebeebbeebbeebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeeb: queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430 :****************************************************************************************************: 5az5_B_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408 SecStr :GGGGG TT EEE S TT SB GGGGG TT EEE S SEE GGGGGGGTT TT EEE SS EE GGGGGS S EEE SS : ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb: queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530 :** **************************************************************************: 5az5_B_1 409:SPXXXXXXXXXXXXXXXXXXXXXXXXTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508 SecStr : ------------------------ SSS TTS SSS S SS HHHHTTS EEE TTS S SSTTTT SEEE TTS S TTTTST: ExpBur :ee------------------------eeeebebeeebbeeeeeebeeebbeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe: Contact : b b queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630 :****************************************************************************************************: 5az5_B_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608 SecStr :T EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS EESS EEE SS HHHHT TT T: ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebbbeebbeeeebebebbeebbbbbbbbeebbeeebee: Contact : b b b b b b b queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730 :****************************************************************************************************: 5az5_B_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708 SecStr :TTTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S HHHH SS EEE SS TT: ExpBur :bbebbeebeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbebbebeebbeebeebbebbebbbbbebebeebbeb: queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817 :***************************************************************************************: 5az5_B_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795 SecStr : TTT TT EEE TTS S GGGG STT EEE TT EE STTTHHHHHHHHH TTSB GGGSBEEESTTTTTSBTT : ExpBur :bbbebebbeebbbbebebeebeebbbeeeeebebeebbbbebebebeeebbebbebbeebeebebbebbebebeeeeebeeebbbee: |