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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [742 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | J 1 (J) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 538T 560D 562S 588V 590N 612E 614V (identity: 100.0 %/94.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5awc_B_1 identity=94.3% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130 :*********** ******************************************************** ******************: 5awc_B_1 9:SRSYPCDEKKQXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108 SecStr : SSSEE --- EEE TTS SS S TT SEEE TTS EE TTSSTT TT EEE S S ------------ EE TTTTTT TT EE: ExpBur :ebeebbbeeee---eebebeebebeebbeebeeebeebebbebebeebeeeebeebeebbebbbbbbbee------------ebebeebbbeebeebeeb: queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230 :****************************************************************************************************: 5awc_B_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208 SecStr :E SS SS S TT EEE SS EE HHHHTT TT SEEE SSS TT S EE TTTTTT TT EEE SS SS SS TT SEEE T: ExpBur :bbbbbebeebbeebbeebbbbbbbbbebbebbeebbbebeebebbebbbbbbeeeeeeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebb: queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330 :****************************************************************************************************: 5awc_B_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308 SecStr :TS EE SSTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS : ExpBur :bbebeebbeeebeebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeeb: queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430 :****************************************************************************************************: 5awc_B_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408 SecStr :GGGGS TT EEE S TT SB GGGGG TT EEE TT SEE GGGGHHHHT TT EEE TTS EE GGGGGGSS SEEE SS : ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb: queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530 :** *************************************************************************: 5awc_B_1 409:SPXXXXXXXXXXXXXXXXXXXXXXXXXDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508 SecStr : ------------------------- SS TTS SSS S SS HHHHTTS EEE TTS S TTTTTT SEEE TTS S TTTTST: ExpBur :ee-------------------------eeebebeeebbeeeeeebeeebeeebebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe: Contact : b b queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630 :****************************************************************************************************: 5awc_B_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608 SecStr :T EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG TT EEE TTS SS BSS EEE TTS HHHHT TT T: ExpBur :ebebbbbbebebebeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebebbeeeeebebebbeebbbbbbbbeebbeeebee: Contact : b b b b b b b b queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730 :****************************************************************************************************: 5awc_B_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708 SecStr :TTTTTTTBTT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S TTT S EEE SS TT: ExpBur :bbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebebbeebeebeebbbebbebeebbeebeebbebbebbbbbebebeebbee: queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817 :************************** ********************************************************: 5awc_B_1 709:FLSEVSSLKHLDLSSNLLKTINKSALXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795 SecStr :SSSS TT EEE SS TTT ----- EEE TT EE SSSSHHHHHHHHH SSB GGGSBEEESTTTTTSBTT : ExpBur :bbeebebbeebbbbebebeebeeebe-----eebeebbbbebebebeeebbebeebbeeeeebebbebbbbebeeeeebeeebbbee: |