Protein Model on 5z14_B_1_I_1 (TEMPLATE: 5z14 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) B 1 (B) polymer(polypeptide(L)) [734 aa] Toll-like receptor 8 :TLR8_HUMAN
2 b I 1 (A) non-polymer(7VC) 4-(7-methoxyquinolin-4-yl)-2-methyl-phenol 494F 495F 518A 519Q 520V (identity: 100.0 %/93.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5z14_B_1 identity=93.3%
queryA        32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
                :*******************************************************************              *******************:
5z14_B_1      10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPXXXXXXXXXXXXXXGLNITDGAFLNLKNLRELL: 109
SecStr          :  SSSEEEEETTEEEEE  SS  SS  S   TT SEEE  SS   EE TTTSSS  S  EEE TT  --------------  EE TTTTTT TT  EEE:    
ExpBur          :eeebbbeeeeeeebbbebeebebeebbeebeeebeebebbebebeebeeebbeebeebeebbbbebe--------------ebebeebbbeebeebeebb:    

queryA       132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
                :****************************************************************************************************:
5z14_B_1     110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr          :  SS  SS  SS  TT SEEE  SS   EE HHHHTT TT  EEE  SSSSS SS SS EE TTTTTS TT  EEE  SS  SS  S   TT  EEE  S:    
ExpBur          :bbebebeebbbebbebbebbbbbebebbebeeebbbebeebeebbbbbbbeeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbe:    

queryA       232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
                :****************************************************************************************************:
5z14_B_1     210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr          :S   EE TTTTTT TT  EEE TTSS   TT SS    SSSS   EE TTTTTT TT  EEE  SS  S   GGGGTT TT  EEE  SS  HHHHHS S:    
ExpBur          :bebeebeeebbeebeebbbbbbbbbbbbbeeeeeeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeebe:    

queryA       332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
                :****************************************************************************************************:
5z14_B_1     310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr          :GGGG TT  EEE  S   TT   SB    GGGGG TT  EEE TT   SEE GGGGSTTSS TT  EEE TT    EE GGGGGS SS  EEE  SS   :    
ExpBur          :bbeebeebeebbbbbbeeeeeeeeebebbebbeebeebebbbbbbbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe:    

queryA       432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
                :***                           **********************************************************************:
5z14_B_1     410:PLVXXXXXXXXXXXXXXXXXXXXXXXXXXXDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr          :   ---------------------------  SS SSS  S SS HHHHTTS EEE TTS  SS  TTTTTT    SEEE  SS    B  S SSTTSTT:    
ExpBur          :bee---------------------------eeeeeebeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:    
Contact         :                                                              bb                      bbb           

queryA       532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
                :*************************************   ************************************************************:
5z14_B_1     510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFXXXGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr          : SEEE TTB  B  STTTTTT TT  EEE  SB    ---   B  GGGGG SS  EEE TT     B S    EESS  EEE  SS HHHHTT SS TT:    
ExpBur          :bebbbbbebebebeeeebbebbeebebbbbbebeeee---eeebbbebbeebeebeebbbbebebeebeeeeebebebbeebbbbbbebbebbeeeeeeb:    

queryA       632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
                :****************************************************************************************************:
5z14_B_1     610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr          :TTTTTEETT  EEE  SS  S   HHHHHTS TT SEEE  SS  S   GGGGGG TT  EEE  SS      S HHHH S   EEE  SS      TTS:    
ExpBur          :bbbbebbeebeebbbbebebeebbeebbebbbebbbebbbbebebeebebebbeebeebebbbbebbebeebbeebeebbebbebbbbbebebeebbeeb:    

queryA       732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
                :**********************         ********************************************************:
5z14_B_1     710:LSEVSSLKHLDLSSNLLKTINKXXXXXXXXXKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796
SecStr          :STT TT  EEE  SS  S    ---------   EEE  S  EE SSTT HHHHHHHH SSSB   GGG BEEESTTSTTSBTTT  :    
ExpBur          :eeebebbeebbbbebebeebee---------ebeebbbbebebebeeebeebeeebeeeeebebbebbbbebeeeeeeeeebbbebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123