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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [747 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | I 1 (A) | non-polymer(L07) | 2-propyl[1,3]thiazolo[4,5-c]quinolin-4-amine | 348Y 353Y 378V 405F (identity: 100.0 %/94.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3w3k_B_1 identity=94.8% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130 :********* ******************************************************** ******************: 3w3k_B_1 9:SRSYPCDEKXXXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108 SecStr : SSEE ----- EEE TTS SS S SS EEE TTS EE TTTT TT EEE TTSS ------------ EE TTSS S S EE: ExpBur :ebeebbbee-----eebebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebbee------------ebebeebbbeebeebebb: queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230 :****************************************************************************************************: 3w3k_B_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208 SecStr :E TTS SS SS TT SEEE SS EE HHHHTT TT EEE SSS TT EE TTTGGG TT EEE SS SS SS TT SEEE T: ExpBur :bbbebebeebbeebbebbbebbbbbbebeebbeebbbebeebebbebbbbbbeeeeeeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebb: queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330 :****************************************************************************************************: 3w3k_B_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308 SecStr :TS EE TTTSTT TT EEE TTSS TT SS GGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS : ExpBur :bbebeebbeeebeebeebbbbbbbbbbbbbeeeebebeebeebeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebeebbeeb: queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430 :****************************************************************************************************: 3w3k_B_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408 SecStr :GGGGG TT EEE S TT SS GGGGG TT EEE S SEE TGGGGGGTT TT EEE SS EE TTHHHHSS SEEE SS : ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebeeebbebbbebeebbbbbbbebebeebebebbeebeebebbbbbebeb: Contact : b b b b queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530 :**** ************************************************************************: 3w3k_B_1 409:SPLVXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508 SecStr : ------------------------ S TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE SS S TTTTST: ExpBur :eeee------------------------eebebeeebbeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbbbebebebebebbeebe: queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630 :****************************************************************************************************: 3w3k_B_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608 SecStr :T SEEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS BSS EEE SS HHHHT TT T: ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebbbbebbbebbbeeeebebebbeebbbbbbbbeebbeeebee: queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730 :****************************************************************************************************: 3w3k_B_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708 SecStr :TTTTTTTBTT EEE TTS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S HHHH SS EEE SS TT: ExpBur :bbebbebbeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbeebebbbbbebebeebbeb: queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 :****************************************************************************************: 3w3k_B_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796 SecStr : TTS TT EEE SS HHHH SS EEE S EE SGGGHHHHHHHHH SSSB S GGG BEEESTTTTT BGGG : ExpBur :bbbebebbebbbbbebebeebeeebbbeeeebebeebbbbebebebeeebbebeebbeeeeebebeebbbbebeeeeeeeeebbbebe: |