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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [734 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | H 1 (H) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 560D 562S 588V 590N 612E 614V (identity: 100.0 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7r54_B_1 identity=93.1% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130 :********************************************************************* ******************: 7r54_B_1 5:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 104 SecStr : SS EEEE SSSEEEE SS SS S S TT SEEE SS EE TTTTTT TT EEE S ------------- EE TTSSTT TT EE: ExpBur :ebeebbebeeeeeeebbebeebebeebbeebbeebbebebbebebeebeeebbeebeebeebbbbebee-------------ebebeebbbeebeebeeb: queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230 :**************************************************** ********************************************: 7r54_B_1 105:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYXXXXCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 204 SecStr :E SS SS SS TT SEEE SS EE TTTTTT TT EEE SS ---- S EE TTTTTT TT EEE SS SS SS TT EEE T: ExpBur :bbbebebeebbeebbebbbebbbbebebeebeeebbbebeebeebebbebbe----eeebebbebbbeebeebebbbbbbbbbeebbeebbeebeebebb: queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330 :****************************************************************************************************: 7r54_B_1 205:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 304 SecStr :T EE GGGGTT TT EEE TTSS SS SS SSS EE TTTTTT TT EEE SS S GGGGTT TT EEE SS HHHHHH : ExpBur :bbebeebeeeebeebeebbbbbbbbbbbbeeeeebeeeebeeeeebebebebbbebeebeebbbbbbbbeebeeebbeebeebebbbbbbbebbebbeeb: queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430 :****************************************************************************************************: 7r54_B_1 305:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 404 SecStr :SGGGG TT EEE S TT SS GGGGG TT EEE TT SEE GGGGGGGTT SS EEE S SEE GGGGTT SS EEE SS : ExpBur :ebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbebbbbbebeeebbebbbebeebebbbbbbbebeebebebbeebeebeebbbbebeb: queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530 :*** *********************************************************************: 7r54_B_1 405:SPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 504 SecStr : ---------------------------- TTS SSS S SS HHHHTTSEEEE SSS SS TTTTTT EEEEE SS B S TTTTST: ExpBur :ebe----------------------------eeeeeebbbeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebbbebebebbeebe: Contact : b b queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630 :********************************************************************** *********************** ***: 7r54_B_1 505:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTXKYNLESKSLVELVFSGNRLDILWXXXDNR: 604 SecStr :T EEE SS B STTTTTT TT EEE TT SS TTTSS GGGGG SS EEE TT - S SS EEE TTS HHHH --- TT: ExpBur :ebebbbbbebbbbbbeeebbbbbeebbbbbbbebebeeeeeeebbbbebbeebeebeebebbebebeebb-eeebebebbeebbbbebbbeebb---eee: Contact : b b b b b b b queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730 :****************************************************************************************************: 7r54_B_1 605:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 704 SecStr :STTTTTT TT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE S S HHHH SS EEE SS : ExpBur :bbebbebbeebeebbbbebebeebeeebbebbbebbeebbbbebebeebebebbeebeebebbbbeebebeebbeeeeebbeebebbbbbebebeeebee: queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 : ***********************************************************************************: 7r54_B_1 705:XXXXXSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 792 SecStr :----- EEE SS GGGG S EEE TT EETTTTTHHHHHHHHH TTSB GGG BEEESGGGTTSBTTS : ExpBur :-----eebebbbbbebebeebeeeebeeeeeebbeebbbbebebebeeebbebbebbeeeeebebeebbebebeeeeeeeebbbeeee: |