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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [740 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | H 1 (H) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 558V 560D 562S 588V 590N 612E 614V (identity: 100.0 %/93.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6zjz_B_1 identity=93.3% |
queryA 30:FSRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRE: 129 :********** ***************************************** *********** *****************: 6zjz_B_1 4:FSRSYPCDEKXXXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGXXXLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLRE: 103 SecStr : SSSEE ----- EEE SS SS S TT EEE SS EE TTSS --- EEE S ------------- EE TTSSTT TT E: ExpBur :eeeeebbeee-----eebebeebebeebbeeeeeebeebebbebebeebeeebbee---eeebbbbebee-------------ebebeebbbeebeebee: queryA 130:LLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFL: 229 :****************************************************************************************************: 6zjz_B_1 104:LLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFL: 203 SecStr :EE SS SS SS TT SEEE TTS EE HHHHTT TT SEEE SSBSSSSS EE TTTTTT TT EEE SB SS SS TT EEE : ExpBur :bbbbebebeebbbebbeebeebbbbbbebeebbeebbbebeebebbbbbbbbeeeeebeebebeebbbeebeebebbbbbbbbbeebbeebbeebeebeb: queryA 230:SNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIAS: 329 :****************************************************************************************************: 6zjz_B_1 204:SNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIAS: 303 SecStr :TTS EE TTTTSS TT EEE TTSS GGG SS GGG EE TTTTSS TT EEE TTS S GGGGTT TT EEE SS HHHHHS: ExpBur :bbbebeebeeeebeebeebbbbbbbbbbbbeebeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbbbebbebbee: queryA 330:GAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENR: 429 :****************************************************************************************************: 6zjz_B_1 304:GAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENR: 403 SecStr : SGGGG TT EEE S TT SS GGGGG TT EEE TT SEE TTTTGGGGG TT EEE S EE GGGGGG SS EEE TT : ExpBur :bebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebe: queryA 430:ISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAI: 529 :***** *********************************************************************: 6zjz_B_1 404:ISPLVXXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAI: 503 SecStr : -------------------------- TTS SSS S SS HHHHTTS EEE SSS SS TTTTTT SEEE SS B S TTTTS: ExpBur :bebee--------------------------eebeeeebbeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebeeebbeeb: Contact : b b queryA 530:PHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDN: 629 :****************************************************************************************************: 6zjz_B_1 504:PHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDN: 603 SecStr :TT SEEE SS B STTTTTT TT EEE S SS S B GGGGG SS EEE TT BSS S EESS EEE TTS HHHHHT TT : ExpBur :eebebbbbbebebbbeebebbebbeebbbbbbbebebeeeeeeeebbbebbeebeebeebebbebebebbeebeebebebbeebbbbbbbbbebbebeee: Contact : b b b b b b b b queryA 630:RYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPS: 729 :****************************************************************************************************: 6zjz_B_1 604:RYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPS: 703 SecStr :TTTTTTTEETT EEE TTS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S HHHH SS EEE SS T: ExpBur :ebbbbbeebeebeebbbbebebeebeeebbebbbeebeebbbbebebeebebebbeebeebebbbbeebebeebbeebeebbebbeebbbbebebeebbe: queryA 730:GFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELTTC: 822 :*************************** ************************************************************: 6zjz_B_1 704:GFLSEVSSLKHLDLSSNLLKTINKSALXXXXXXKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELTTC: 796 SecStr :TSTTT TT EEE SS S STT ------ EEE TT EE SGGGHHHHHHHHH TTSB GGGSBEEESTTTTTSBTTSS GGG : ExpBur :bbbeebebbebbbbbebebeebeeebe------ebeebbbbebebebeeebbebbebbeeeeebebeebbbbebeeeeeeeeebbbebeeeee: |