CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD:![]() ![]() ![]()
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [738 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | H 1 (H) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 538T 558V 560D 562S 588V 590N 612E 614V (identity: 100.0 %/93.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5z15_B_1 identity=93.9% |
queryA 33:SYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLL: 132 :******* ******************************************************** ********************: 5z15_B_1 11:SYPCDEKXXXDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPXXXXXXXXXXXXXXGLNITDGAFLNLKNLRELLL: 110 SecStr : SSEE --- EEE TTS SS S TT SEEE SS EE TTTTTT S EEE S -------------- EE TTSSTT TT EEE : ExpBur :eebbbee---eeeebebeebebeebbeebeeebeebebbebebeebeeebbeebeebeebbbbebe--------------ebebeeebbeebeebeebbb: queryA 133:EDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 232 :****************************************************************************************************: 5z15_B_1 111:EDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 210 SecStr : SS SS SS TT SEEE SS EE HHHHTT TT EEE SSSSSSSS SS EE TTTTTT TT EEE SS SS S TT SEEE TTS: ExpBur :bebebeebbbebbebbebbbbbbbebeebeeebbbebeebeebebbbbbeeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbeb: queryA 233:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 332 :****************************************************************************************************: 5z15_B_1 211:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 310 SecStr : EE TTTTTT S EEE TTSS TT SS BTTTB EE SSTTTT TT EEE SS S GGGGTT TT EEE SS HHHHHS SG: ExpBur :ebeebeeeebeebeebbbbbbbbbbbbbeeeeeeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeebeb: queryA 333:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 432 :****************************************************************************************************: 5z15_B_1 311:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 410 SecStr :GGG TT EEE TT TT S GGGGS TT EEE TT SEE GGGGSTTTT TT EEE SS SEE GGGGGS SS EEE TT : ExpBur :beebeebeebbbbbbeeeeeeeeebebbebbeebeebebbbbbbbbbeebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebeb: queryA 433:LVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 532 :***** ************************************************************************: 5z15_B_1 411:LVKDTXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 510 SecStr : ----------------------- TTS SSS S SS HHHHTTS EEE SS SS TTSSTT SEEE SS B S TTTTSTT : ExpBur :eeeee-----------------------eebeeeebbeeeebbeeebeeeeebbbbbebebeebbebbbeebbebbbbbbbebebebebebebbeebeeb: Contact : b b queryA 533:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 632 :************************************ *************************************************************: 5z15_B_1 511:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFXXXGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 610 SecStr :SEEE SS B STTTTTT TT EEE TT --- B HHHH TT EEE TT BSS EESS EEE TTS HHHHHS TT TTT: ExpBur :ebbbbbebebebeeeebbebbeebebbbbbebeeee---eeebbbebbeebeebeebebbebebeebeebeebebebbeebbbbbbebbebbeeeeeebb: Contact : b b b b b b b b b queryA 633:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFL: 732 :****************************************************************************************************: 5z15_B_1 611:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFL: 710 SecStr :TTTTEETT EEE SS S HHHHHTS TT SEEE SS S TTTTSS TT EEE SS S HHHH S EEE SS SSSS: ExpBur :bbbebbeebeebbbbebebeebbeebbebbbebbbebbbbebebeebebebbeebeebeebbbebbebeebbeebeebbebbebbbbbebebeebbeebe: queryA 733:SEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 :************************ *********************************************************: 5z15_B_1 711:SEVSSLKHLDLSSNLLKTINKSALXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796 SecStr :SS S SEEE TTS STT ----- EEE TT EE SSS SHHHHHHHH SS TTGGG BEEESTTSTTSBTTS : ExpBur :eebebbeebbbbebebeebeeebe-----eebeebbbbebebebeeebeebbebbeeeeebebbebbebebbbeeebeeebbeebe: |