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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [734 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | H 1 (H) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 558V 560D 562S 588V 590N 612E 614V (identity: 100.0 %/93.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5z14_B_1 identity=93.3% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131 :******************************************************************* *******************: 5z14_B_1 10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPXXXXXXXXXXXXXXGLNITDGAFLNLKNLRELL: 109 SecStr : SSSEEEEETTEEEEE SS SS S TT SEEE SS EE TTTSSS S EEE TT -------------- EE TTTTTT TT EEE: ExpBur :eeebbbeeeeeeebbbebeebebeebbeebeeebeebebbebebeebeeebbeebeebeebbbbebe--------------ebebeebbbeebeebeebb: queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231 :****************************************************************************************************: 5z14_B_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209 SecStr : SS SS SS TT SEEE SS EE HHHHTT TT EEE SSSSS SS SS EE TTTTTS TT EEE SS SS S TT EEE S: ExpBur :bbebebeebbbebbebbebbbbbebebbebeeebbbebeebeebbbbbbbeeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbe: queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331 :****************************************************************************************************: 5z14_B_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309 SecStr :S EE TTTTTT TT EEE TTSS TT SS SSSS EE TTTTTT TT EEE SS S GGGGTT TT EEE SS HHHHHS S: ExpBur :bebeebeeebbeebeebbbbbbbbbbbbbeeeeeeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeebe: queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431 :****************************************************************************************************: 5z14_B_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409 SecStr :GGGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGSTTSS TT EEE TT EE GGGGGS SS EEE SS : ExpBur :bbeebeebeebbbbbbeeeeeeeeebebbebbeebeebebbbbbbbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe: queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531 :*** **********************************************************************: 5z14_B_1 410:PLVXXXXXXXXXXXXXXXXXXXXXXXXXXXDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509 SecStr : --------------------------- SS SSS S SS HHHHTTS EEE TTS SS TTTTTT SEEE SS B S SSTTSTT: ExpBur :bee---------------------------eeeeeebeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee: Contact : b b queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631 :************************************* ************************************************************: 5z14_B_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFXXXGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609 SecStr : SEEE TTB B STTTTTT TT EEE SB --- B GGGGG SS EEE TT B S EESS EEE SS HHHHTT SS TT: ExpBur :bebbbbbebebebeeeebbebbeebebbbbbebeeee---eeebbbebbeebeebeebbbbebebeebeeeeebebebbeebbbbbbebbebbeeeeeeb: Contact : b b b b b b b b queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731 :****************************************************************************************************: 5z14_B_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709 SecStr :TTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S HHHH S EEE SS TTS: ExpBur :bbbbebbeebeebbbbebebeebbeebbebbbebbbebbbbebebeebebebbeebeebebbbbebbebeebbeebeebbebbebbbbbebebeebbeeb: queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 :********************** ********************************************************: 5z14_B_1 710:LSEVSSLKHLDLSSNLLKTINKXXXXXXXXXKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796 SecStr :STT TT EEE SS S --------- EEE S EE SSTT HHHHHHHH SSSB GGG BEEESTTSTTSBTTT : ExpBur :eeebebbeebbbbebebeebee---------ebeebbbbebebebeeebeebeeebeeeeebebbebbbbebeeeeeeeeebbbebe: |