CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [746 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | GA 1 (B) | non-polymer(SO4) | SULFATE ION | 715R 739K 763K (identity: 100.0 %/94.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3w3j_B_1 identity=94.8% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130 :*********** ******************************************************** ******************: 3w3j_B_1 9:SRSYPCDEKKQXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108 SecStr : SSEEE --- EEE TTS SS S TT EEE TTS EE TTTTTT TT EEE TTSS ------------ EE TTTTTT TT EE: ExpBur :ebebbbeeeee---ebbebbebebeebbeebeeebbebbbbebebeebeeebbeebeebbebbbbebbee------------ebebeebbbeebeebeeb: queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230 :****************************************************************************************************: 3w3j_B_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208 SecStr :E TTS SS SS TT SEEE SS EE TTTTTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS SS TT SEEE T: ExpBur :bbbebebeebbeebbeebbbbbbbbbebbebeeebbbebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb: queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330 :****************************************************************************************************: 3w3j_B_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308 SecStr :TS EE TTTTTT TT EEE TTSS TT SS GGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE TTS HHHHHS : ExpBur :bbebeebbeeebeebeebbbbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeeb: queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430 :****************************************************************************************************: 3w3j_B_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408 SecStr :GGGGG TT EEE S TT SS GGGGG TT EEE TT SEE TGGGGGGTT TT EEE SS EE GGGGGGSSS EEE SS : ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbebbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb: queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530 :** ************************************************************************: 3w3j_B_1 409:SPXXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508 SecStr : -------------------------- S TTS SSS S SS HHHHTTSEEEE SS TTTTTT EEEEE TTS S TTTTST: ExpBur :ee--------------------------eebebeeebbeeeeebbeeebeeeeebbbbbebebeebeeebbeebbebbbbbbbbbebebebebebbeebe: queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630 :****************************************************************************************************: 3w3j_B_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608 SecStr :T SEEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS EESS EEE TTS HHHHT TT T: ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebebbbeeeebebebbeebbbbbbbbeebbeeeeee: queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730 :****************************************************************************************************: 3w3j_B_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708 SecStr :TTTTTTEETT EEE SS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S GGGT SS EEE SS TT: ExpBur :bbebbebbeebeebbbbebebeebeeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbeebebbbbbebebeebbee: Contact : b queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817 :***************************************************************************************: 3w3j_B_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795 SecStr :HHHH SS SEEE TTS S SGGG S EEE TT EE SGGGHHHHHHHHT TTSB SSGGG BEEESTTTTTSBGGG : ExpBur :bbeebebbebbbbbebebebbeeebbeeeeeeebeebbbbebebebeeebbebeebbeeeeebebbebbbbebeeeeeeeeebbeee: Contact : b b |