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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [743 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | G 1 (G) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 426S 472R 475I 476K 479C 487D 489S 490L 511N 513S 534Y 536D (identity: 100.0 %/94.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3w3g_B_1 identity=94.6% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131 :******************************************************************** *******************: 3w3g_B_1 10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLRELL: 109 SecStr : SSEEEESSS EEEE SS SS S S TT SEEE SS EE TTTS S SS EEE S ------------- EE TTTTTT TT EEE: ExpBur :eeebbbbeeeeeebebebbebebeebbeebbeebbebebbebebeebeeebbeebeebeebbbbebee-------------ebebeebbbeebeebeebb: queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231 :****************************************************************************************************: 3w3g_B_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209 SecStr : SS SS SS TT SEEE SS EE HHHHTT TT SEEE SSSSS SS SS EE TTTTGGG S EEE SS SS SS TT SEEE TT: ExpBur :bbebebeebbbebbebbeebbbbebebeebeeebbbebeebebbebbbbbbeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb: queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331 :****************************************************************************************************: 3w3g_B_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309 SecStr :S EE HHHHTT TT EEE TTSS SS SS SSS EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS G: ExpBur :bebeebbeeebeebeebebbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebebbeebeebebbbbbbbebbebbeebe: queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431 :****************************************************************************************************: 3w3g_B_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409 SecStr :GGGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGHHHHT TT EEE SS EE GGGGGS SS EEE SS : ExpBur :bbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe: Contact : b queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531 :**** ***********************************************************************: 3w3g_B_1 410:PLVKXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509 SecStr : ------------------------- TTS SS S SS HHHHTTS EEE TTS S TTTTTT SEEE SS B S TTTTSTT: ExpBur :beee-------------------------eebeeeebbeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbbbebebebebebbeebee: Contact : b bb b b bb b b queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631 :****************************************************************************************************: 3w3g_B_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609 SecStr : SEEE SS B STTTTTT TT EEE TT SS TTTSS GGGGG SS EEE TT SS BSS EEE SS HHHHHT TT TT: ExpBur :bebbbbbebebbbbeeebbbbbeebebbbbbebebeeeeeeebbbbebbeebeebeebbbbebebeebeeeeebebebbeebbbbbbbbbebbebeeeeb: Contact : b b queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731 :****************************************************************************************************: 3w3g_B_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709 SecStr :TTTTTTBTT EEE TTS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT SS EEE SS S : ExpBur :beebebbeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbeebbbbebebeebbeee: queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVS: 816 : *********************************************************************************: 3w3g_B_1 710:XXXXSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVS: 794 SecStr :---- SEEE SS S GGG SS EEE TT EE SSTTHHHHHHHHH TTSB GGGSBEEESTTTTT BTT : ExpBur :----ebbeebbbbebebeebeeebbeeeeeeebeebbbbebebebeeebeebeebbeebeebebbebbbbebeeeeebeeebbee: |