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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (A) | polymer(polypeptide(L)) [774 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
2 | b | F 1 (F) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 181C 182Y 186V(P) 187C 188E(Y) 189K(V) 190T(S) 212S(N) 233Q(M) (identity: 33.3 %/41.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5zse_B_1 identity=41.5% |
queryA 30:FSRSYPCDEK--KQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNL: 127 :* *** ** * * * * * * * * * * ** * * * * * * * * *: 5zse_B_1 8:FPKTLPCDVTLDVSKNHVIVDCTDKHLTEIPGGIPTNTTNLTLTINHIPDISPASFHRLVHLVEIDFRCNCVPIRLGSKSNMCPRRLQIKPRSFSGLTYL: 107 SecStr :S SSEEEEEGGGTEEEEE TT SS TT TT EEE SS EE TTTTTT TT SEEE SS TTTS SSS S EE TTTTTT TT : ExpBur :eeeebebeeeeeeeeeebebebbebebeebbeebeeebbbbbbbebebeebbeebbeebeebeebbbbbbbebeeebeeeeeeeeebeeeeebbeebeeb: queryA 128:RELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRK: 226 : * * *** ** *** ** *** *** * ** * * *** *** * ** * ** * *** * ** *** * : 5zse_B_1 108:KSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKEQLTELANIEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTE: 207 SecStr : EEE SS S TT EEE TTSS EE GGGGGGGTT EEE SSSBTTB SS EE TTTTTT TT EEE SS S SS TT SE: ExpBur :ebbbbbbbbbeebbeebbeebebbbbbbbbbeebeeebbebbeebeebebbbbbbeebebeeebeeeeebbeebeebebbbbbbbebeebbeebbeebbe: Contact : bb bbbbb b queryA 227:LFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGE: 326 :* * * * * * ** * * ********** ****** ** * ** ** * * * * ** **** * *** * * *: 5zse_B_1 208:LYLYNNMIAEIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCTPCKNNSPLQIPVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAKE: 307 SecStr :EE SS B TTTTTT TT EEE TTSS TT SS GGG B TTTTTT TT EEE SS GGGGSS EEE SSS HHH: ExpBur :bbbbbbebeebeeebbeebeebebbbbbbbbbbeeeeebeeeebeeeebbebeeebbbebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbeb: Contact : b queryA 327:IASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLS: 426 :* ** ** * ****** * * * ** * ** * ***** ** ** * ** ** **** * * * * **: 5zse_B_1 308:IGDAKFLHFLPNLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLS: 407 SecStr :HTT GGGGG TT EEE S TT BSS GGGGG TT EEE TT BSEE GGGGGGGTT TT EEE SS EE GGGGGGGTT SEEE : ExpBur :beebebbeebeebeebbbbbbbeeeeeeeebebbebbeebebbebbbbbbbbbeebeeebbebbeebeebebbbbbebebeebebbbbeebeebebbbbb: queryA 427:ENRISPLVKDTRQSYANSSSFQRHIRKRRSTD----FEFDPHSNFYHF-----TRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSN: 517 : * *** * * * * ** **** ****** * * ***** * : 5zse_B_1 408:VNKISPXXXXXXXXXXXXXXXXXXXXXXXVLEQLYYFRYDKYARSCRFXXXXXXXXXXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLI: 507 SecStr :SS ----------------------- SS TTSS TT TT ------------ GGGS EEE TTS GGGGTT TT SEEE TTS : ExpBur :ebebee-----------------------eebeeebeebbeeeeeeee------------ebeeeeebbbbbebebeebeeeebeebebbbbbbbbebeb: queryA 518:AQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSG: 617 : * * * ** *** ***** * ** ***** * ***** * ** * * * * * * * * ** ** * * *: 5zse_B_1 508:SQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR-TMESESLRTLEFRG: 606 SecStr : B S TTTT TT EEE SS BTT TTTTTT TT EEE S GGGGSTT GGGGGG TT EEE TT SSS- BSS EEE TT: ExpBur :ebebebebbeebeebebbbbbebebbbeeeebbebbeebebbbbbebeeebeeeeeebbbebbeebeebeebbbbebebeebebe-ebebebbebbbbeb: queryA 618:NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTL: 717 :* ** ** * **** ** * * ** * * * * * * * * * ** * * * ** *** * * ** ** *: 5zse_B_1 607:NHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNL: 706 SecStr :S HHHHT TT TTTTTTTTBTT EEE SS SS TTTTTTS TT EEE SS GGGGGG TT EEE SS S GGGT SS EE: ExpBur :bebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebeebeebeebebbebbebebeebbeebbebbeebeeb: queryA 718:LLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLV-DVICASPGDQRGKSIVS: 816 : * * * * ** * ****** * * * ** ** * * **** * * * * ** * ** * ** * * *: 5zse_B_1 707:ILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAVWFVWWV-QHTEVTIPYLATDVTCVGPGAHKGQSVIS: 805 SecStr :E SS TTTTTT TT EEE SS TTTS HHHHTT SEEE SS EE SGGGHHHHHHH-HH S TTHHHH BEEESGGGTT BSTT: ExpBur :bbeebebeebbeebbeebebbeebbbbebebeebeeebbbeebbeebeebbbbebebebeeebebbbebb-bbbebebeeeeeebebebeeeeeeeebbe: queryA 817:LELTTC: 822 :* * **: 5zse_B_1 806:LDLYTC: 811 SecStr : GGG: ExpBur :bebeee: |