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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [745 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | F 1 (F) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 226K 228F 230S 250L 252D 254S 291Y 293N 464H 465S 466N 467F 468Y (identity: 100.0 %/94.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5wyz_B_1 identity=94.7% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131 :********************************************************************* ********************: 5wyz_B_1 10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109 SecStr : SSSEEEEETTEEEEE SS SS S S TT EEE SS EE SSSS S TT EEE S S ----------- EE TTTTTT TT EEE: ExpBur :eeebbbeeeeeeebbbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebeee-----------eebebeebbbeebeebeebb: queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231 :****************************************************************************************************: 5wyz_B_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209 SecStr : SS SS SS TT SEEE SS EE HHHHTT TT SEEE SSBSS SS SS EE TTTTTT TT EEE SB SS S TT EEE TT: ExpBur :bbebebeebbeebbebbebbbbbebebeebeeebbbebeebeebbbbbbbeeeeebeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb: Contact : b b b queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331 :****************************************************************************************************: 5wyz_B_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309 SecStr :S EE TTTTTT TT EEE TTSS TT SS STTS EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS G: ExpBur :bebeebbeebbeebeebbbbbbbbbbbbbeeeeeeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebeebbeebe: Contact : b b b b b queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431 :****************************************************************************************************: 5wyz_B_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409 SecStr :GGGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGGGGTT TT EEE TT EE GGGGGG SS EEE TT : ExpBur :bbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe: queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531 :****** ***********************************************************************: 5wyz_B_1 410:PLVKDTXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509 SecStr : S ----------------------- TTS SSS S SS HHHHTTS EEE TTS SS TTTTTT SEEE SS B S TTTTSTT: ExpBur :beeeee-----------------------eeeeeeebbeeeeebeeebeeeeebbbbbebebeebbebbbeebbebbbbbbbebebebebebebbeebee: Contact : bbbbb queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631 :****************************************************************************************************: 5wyz_B_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609 SecStr : EEE SS B STTTTTT TT EEE TT TT TT B GGGGG SS EEE TT BSS BSS EEE TTS HHHHTT TT TT: ExpBur :bebbbbbebebebeeeebbbbbeebbbbbbbebbeeeeeeeeebbbebbeebeebeebbbbebebebbeebeebebebbeebbbbbbebbebbebeeeeb: queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731 :****************************************************************************************************: 5wyz_B_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709 SecStr :TTTTTTBTT EEE TTS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT S EEE SS TTS: ExpBur :bebbebbeebeebbbbebebeebbeebbeebbeebbebbbbebebeebebebbeebeebebbbbeebebeebbeebeebbebbeebbbbebebeebbeeb: queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818 :********************** *********************************************************: 5wyz_B_1 710:LSEVSSLKHLDLSSNLLKTINKXXXXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 796 SecStr :SSS TT EEE SS -------- EEE TT EE SGGGHHHHHHHHT TTSB GGG BEEESTTTTTSBTTS : ExpBur :eeebebbeebbbbebebeebee--------eebeebbbbebebebeeebeebeeebeeeeebebeebbebebeeeeeeeeebbeebe: |