CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD:![]() ![]() ![]()
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [762 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
2 | b | F 1 (F) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 181C 182Y 183F(Y) 186V(P) 187C 188E(Y) 189K(V) 190T(S) 212S(N) (identity: 33.3 %/41.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5gmg_B_1 identity=41.3% |
queryA 30:FSRSYPCDEK--KQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNL: 127 :* *** ** * * * * * * * * * * ** * * * * * * * * *: 5gmg_B_1 8:FPKTLPCDVTLDXXXXHVIVDCTDKHLTEIPGGIPTNTTNLTLTINHIPDISPASFHRLVHLVEIDFRCNCVPIRLGSKSNMCPRRLQIKPRSFSGLTYL: 107 SecStr :S SSSEE ---- EEE TTS SS TT TT SEEE S EE HHHHTT TT EEE SS TTTS SSS S EE TTSSTT TT : ExpBur :eeeebebeeeee----ebebebeebebeebbeebeeebbbbbbbebebeebbeebbeebeebeebbbbbbbebeeebeeeeebeeebeeeeebbeebeeb: queryA 128:RELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRK: 226 : * * *** ** *** ** *** *** * ** * * *** *** * ** * ** * *** * ** *** * : 5gmg_B_1 108:KSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKEQLTELANIEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTE: 207 SecStr : EEE SS SS TT EEE TTSS EE TTTTGGGTT EEE SSSBTTB SS EE TTTTTT TT EEE SS S SS TT E: ExpBur :ebbbbbbbbbeebbeebbeebebbbbbbbbbeebeeebbebbeebbebebbbbbbeebebeeebeeeeebbeebeebebbbbbbbebeebbbebbebbbe: Contact : bbb bbbbb b queryA 227:LFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGE: 326 :* * * * * * ** * * ********** ****** ** * ** ** * * * * ** **** * *** * * *: 5gmg_B_1 208:LYLYNNMIAEIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCTPCKNNSPLQIPVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAKE: 307 SecStr :EE SS B TTTTTT TT EEE SSS TT SS GGG B TTTTTT TT EEE SS S GGGGTT EEE SSS HHH: ExpBur :bbbbbbebeebeeebbeebeebebbbbbbbbbbeeeeeeeeeeeeeeeebebeeebbeebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbeb: queryA 327:IASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLS: 426 :* ** ** * ****** * * * ** * ** * ***** ** ** * ** ** **** * * * * **: 5gmg_B_1 308:IGDAKFLHFLPNLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLS: 407 SecStr :HHH GGGGG TT EEE S TT BSS GGGGG TT EEE TT BSEE GGGGGGGTT TT EEE SS EE GGGGGGGTT SEEE : ExpBur :beebebbeebeebeebbbbbbbeeeeeeeebebbebbeebebbebbebebbbbeebeeebbebbeebeebebbbbbbbebeebebbbbeebeebebbbbb: queryA 427:ENRISPLVKDTRQSYANSSSFQRHIRKRRSTD----FEFDPHSN-----FYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSN: 517 : * *** * * * ** **** ****** * * ***** * : 5gmg_B_1 408:VNKISPXXXXXXXXXXXXXXXXXXXXXXXXXXXLYYFRYDKYARSCRXXXXXXXXXXXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLI: 507 SecStr :S --------------------------- TT S TT ------------- GGGSSEEE SS GGGGTT TT SEEE TT : ExpBur :ebebee---------------------------eebbebbbeeeeee-------------ebeebeebbbbbebebeebeeebbeebebbbbbbbbebeb: queryA 518:AQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSG: 617 : * * * ** *** ***** * ** ***** * ***** * ** * * * * * * * * ** ** * * *: 5gmg_B_1 508:SQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR-TMESESLRTLEFRG: 606 SecStr : S SSTT TT EEE SS TTTTTT TT EEE TT GGGGSTT TTTTSS TT EEE TT SS - BSS EEE S: ExpBur :ebebebebbeebeebebbbbbebebbbeeeebbebbeebebbbbbebeeebeeeeeebbbebbeebeebeebbbbebebeebebe-ebebebbebbbbeb: queryA 618:NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTL: 717 :* ** ** * **** ** * * ** * * * * * * * * * ** * * * ** *** * * ** ** *: 5gmg_B_1 607:NHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNL: 706 SecStr :S HHHHT TT TTTTTTTTBTT EEE SS S TTTTTTS TT EEE SS GGGGGG TT EEE SS S GGGT SS EE: ExpBur :bebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebeebeebeebebbebbebebeebbeebbebbebbeeb: queryA 718:LLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLV-DVICASPGDQRGKSIVS: 816 : * * * * ** * ****** * * * ** ** * * **** * * * * ** * ** * ** * * *: 5gmg_B_1 707:ILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAVWFVWWV-QHTEVTIPYLATDVTCVGPGAHKGQSVIS: 805 SecStr :E SS S TTTTTT TT EEE SS TTTS HHHHTT SEEE S EE SGGGHHHHHHH-HH SB TTTTTT BEEESGGGTT BTTT: ExpBur :bbeebebeebbeebbeebeebeebbbbebbbeebeeebbbeebbeebeebbbbebebebeeebebbbebb-bbbebebeebeeebebebeeeeeeeebbe: queryA 817:LELTTC: 822 :* * **: 5gmg_B_1 806:LDLYTC: 811 SecStr : TT : ExpBur :bebeee: |