[pdbjlvh2]Protein Model on 4rca_B_1_E

Protein Model on 4rca_B_1_E_1 (TEMPLATE: 4rca )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [241 aa]	SLIT and NTRK-like protein 1 :SLIK1_HUMAN
2	b		E 1 (B)	non-polymer(SO4)	SULFATE ION	799V(G) 800D(R) 801V 813S(D) 814I(L) (identity: 20.0 %/29.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4rca_B_1 identity=29.6%

queryA       597:YTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLR: 696
                : *              *   ** *  *           *    *   *    * *  *   *** *      **** *  * *          ** *   :
4rca_B_1      28:FTSLQRFTAPTSQFYHLFLHGNSLTRLFPNE-------FANFYNAVSLHMENNGLHEIVPGAFLGL-QLVKRLHINNNKIKSFRKQTFLGLDDLEYLQAD: 119
SecStr          : S SSS    SS  EEEE TTS   EE TTT-------TGGGTTEEEEE  SS   EE TTTTTT - S  EEE  SS   EE TTTTTT SS  EEE  :    
ExpBur          :beebeebebeeeeebebbbbebebeebeeeb-------beebebbebbbbbebebeebeebbbeeb-eebeebbbbebebeebeeebbebbeebebbbbb:    

queryA       697:GNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIP: 796
                : * *             *  * *  * ** **      *    ****  * ***                  *  **  ****      *        **:
4rca_B_1     120:FNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYV-PITHLDLRGNRLKTLPYEEV-LEQIPGIAEILLEDNPWDCTCDLLSLKEWLE-----NIP: 212
SecStr          :SS   EE GGGSTT TT  EEE  SS      TTTTTT -   EEE  SS      IIII-ITT TT SEEE  S  EE STTTHHHHHHHH-----HS :    
ExpBur          :ebebeebbebbbeebeebebbbbbebebeebeeebbeeb-ebebbbbeebebeebeeeeb-beebeebeebbbeebbbebeeebbebbebbe-----ebe:    

queryA       797:R---LVDVICASPGDQRGKSI: 814
                :       * *  *    **  :
4rca_B_1     213:KNALIGRVVCEAPTRLQGKDL: 233
SecStr          :TT B S  BEEE TTTTT BG:    
ExpBur          :eebeeeebebeeeeebeeebb:    
Contact         :   b bbb           bb

Protein Model on 4rca_B_1_E_1 (TEMPLATE: 4rca )

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