Protein Model on 4j4l_B_1_D_1
(TEMPLATE: 
4j4l
)Protein Model on 4j4l_B_1_D_1
(TEMPLATE: 4j4l
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [251 aa] | Internalin B,REPEAT MODULES,Variable lymphocyte receptor B :A4L9V2_LISMN:Q4G1L3_EPTBU | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [166 aa] | Interleukin-6 :IL6_HUMAN | 625N 626D(N) 643R(Y) 645D(A) 668E(Y) 670H(T) 672N(E) 692L(E) 694D(Q) 696R(W) 716T(Y) 718L(N) 721H(F) 740H(E) 742D 745S(Y) 770H 771G(D) (identity: 16.7 %/31.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4j4l_B_1 identity=31.4% |
queryA 622:ILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSH: 721
:* * * * * * * * * * * ** * * * * * * * * * * * * * * :
4j4l_B_1 39:IIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI---SALKELTNLTYLTLEPNQLQSLPNGVFDKLTNLKELQLWANQLQSLPDGVFDKLTNLTYLNLAF: 135
SecStr :EEESS SB TTGGG TT EEEEEETT B ---GGGGG TT EEEEEETT S TTTTTT TT EEEE TT TTTTTT TT SEEE S:
ExpBur :bebeebebebbebbeebeebeebbbbbeebeeb---ebbeebeebbebbbebeebeebeeebbeebeebeebebbbeebeebeeebbeebeebebbbbbe:
Contact : bb b b b b b b b b b b b
queryA 722:NRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTT----------------------TKLSMLELHGNPFECTC-DIGDFRRWMDEHLNV: 793
:* ** * * **** * * * * * * ** ** *** * * * *:
4j4l_B_1 136:NQLQSLPKGVFDKLTNLTELDLSYNQLQSLPKGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGV: 230
SecStr :S SB TTTTTT TT EEE SS SB TTTTTT TT EEE SS SSTTTT TT EEE SS B TTTTHHHHHHHHHHTTT:
ExpBur :bebeebbeebbeebeebeebbbbebebeebeeebbeebeebebbebbebebeebeebbbeebeebeebbbbebebeeeeeebebbbebbeeeeeb:
Contact : b b b b bb bb
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[assembly_id:2]
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