Protein Model on 8s9h_B_1_A_1
(TEMPLATE: 
8s9h
)Protein Model on 8s9h_B_1_A_1
(TEMPLATE: 8s9h
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [768 aa] | Toll-like receptor 7 :G8E2R2_MACMU | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [768 aa] | Toll-like receptor 7 :G8E2R2_MACMU | 102H(R) 106N(K) 107P(S) 183F(Y) 184N(R) 261F(Y) 262N 263A 264P 265F 266P 405F 427E(V) 429R(K) 459F 490L(K) 491N 494F 514A(G) 515N 516S(L) 518A(S) 539N 541R 566H 567Y 569R(Q) 570I(S) 571A(E) 572G 573V(I) 574T 600T 625N(R) 626D 627D(G) 628D 630R 653H(F) 677K 678F(S) 773P(R) (identity: 50.0 %/41.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8s9h_B_1 identity=41.3% |
queryA 30:FSRSYPCDEK--KQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNL: 127
:* *** ** * * * * * * * * * * ** * * * * * * * * *:
8s9h_B_1 8:FPKTLPCDVTLDVSKNHVIVDCTDKHLTEIPGGIPTNTTNLTLTINHIPDISPASFHRLVHLVEIDFRCNCVPIRLGSKSNMCPRRLQIKPRSFSGLTYL: 107
SecStr :S SSEEEEETTTTEEEEE TT SS S TTEEEEE S EE TTTTSS TT SEEE SSS TTTS STT SS EE TTSSTT TT :
ExpBur :eeeebebeeeeeeeeeebebebeebebeeebeebeeebbbbbbbebebeebbeebbeebeebeebbbbbbbebeebbeeeeebeeebeeeeebbeebeeb:
Contact : b bb
queryA 128:RELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRK: 226
: * * *** ** *** ** *** *** * ** * * *** *** * ** * ** * *** * ** *** * :
8s9h_B_1 108:KSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKEQLTELANIEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTE: 207
SecStr : EEE SS SS S TT EEE SSS EE TTTTGGGTT EEE SSSBTTB SS BEE TTTTTT TT EEE SS B S SS TT SE:
ExpBur :bbbbbbbbbbeebbeebbeebebbbbbbbbbeebeeebbebbeebeebbbbbbbbeebebeeebeeeeebbeebeebbbbbbbbbebeebbeebbebbee:
Contact : bb
queryA 227:LFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGE: 326
:* * * * * * ** * * ********** ****** ** * ** ** * * * * ** **** * *** * * *:
8s9h_B_1 208:LYLYNNMIAEIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCTPCKNNSPLQIPVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAKE: 307
SecStr :EE SS B TTTTTT TT EEE SSS TT SS GGG B TTTTTT TT EEE SS S GGGGSS S EEE SSS HHH:
ExpBur :bbbbbbebeebeeebbeebeebeebbbbbbbbbeeeeebeeeeeeeebbbebeeebbbebeebbbbbbbbbbbeebeeebbeebeebebbbbbbbebbeb:
Contact : bbbbbb
queryA 327:IASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLS: 426
:* ** ** * ****** * * * ** * ** * ***** ** ** * ** ** **** * * * * **:
8s9h_B_1 308:IGDAKFLHFLPNLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLS: 407
SecStr :HTT GGGGG TT EEE S TT EEE GGGGG TT EEE TT EEEE GGGGGGGTT TT EEE SS EE GGGGGG TT SEEE :
ExpBur :bbebebbeebeebeebbbbbbbeeeeeeeebebbebbeebeebeebebebbbbeebeeebbebbbebeebebbbbbebebeebebbbbeebeebebbbbb:
Contact : b
queryA 427:ENRISPLVKDTRQSYANSSSFQRHIRKRRSTD----FEFDPHSN-----FYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSN: 517
: * *** * * * ** **** ****** * * ***** * :
8s9h_B_1 408:VNKISPXXXXXXXXXXXXXXXXXXXXXXXXXXXLYYFRYDKYARSCXXXXXXXXXXXXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLI: 507
SecStr :S --------------------------- SSSS TT -------------- GGGS EEE S GGGGTT TT SEEE S :
ExpBur :ebebee---------------------------eebbebbbeeeee--------------ebeeeeebbbbbebebeebeeeebeebebbbbbebbebeb:
Contact :b b bbbb bb b bbb
queryA 518:AQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSG: 617
: * * * ** *** ***** * ** ***** * ***** * ** * * * * * * * * ** ** * * *:
8s9h_B_1 508:SQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR-TMESESLRTLEFRG: 606
SecStr : B S SSTT S EEE SS B STTTTTT TT EEE S HHHHSTT GGGGGG TT EEE TT S S- BSS EEE S:
ExpBur :ebebebebbebbeebebbbbbebebbbeeeebbebbeebebbbbbebbebbeeeeeebbbebbeebeebeebbbbebebeebebe-ebebebbebbbbee:
Contact :b b b bb bbbbbb b
queryA 618:NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTL: 717
:* ** ** * **** ** * * ** * * * * * * * * * ** * * * ** *** * * ** ** *:
8s9h_B_1 607:NHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNL: 706
SecStr :S HHHHT TT SSTTTTTTBTT EEE SS SS TTTTTTS TT EEE SS GGGGGS TT EEE SS S STTT SS EE:
ExpBur :bebbebbeeebeebbebbeebebbeebbbbebebeebbeebbebbbeebbebbbbebebeebebeebeebeebebbbbbebebeebbeebbebbeebbeb:
Contact : bbbb b b bb
queryA 718:LLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLV-DVICASPGDQRGKSIVS: 816
: * * * * ** * ****** * * * ** ** * * **** * * * * ** * ** * ** * * *:
8s9h_B_1 707:ILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAVWFVWWV-QHTEVTIPYLATDVTCVGPGAHKGQSVIS: 805
SecStr :E SS TTTTTT TT EEE SS TTTS HHHHTT SEEE S EE SGGGHHHHHHH-HT S TTHHHH BEEESGGGTT BSTT:
ExpBur :ebeebebeebbeebbeebeebeebbbbebbbeebeeebbbeebbeebeebbbbebebebeeebebbbebb-bbbebebeeeeeebebebeeeeeeeebbe:
Contact : b
queryA 817:LELTTC: 822
:* * **:
8s9h_B_1 806:LDLYTC: 811
SecStr : GGG:
ExpBur :bebeee:
|
[assembly_id:1]
[help]