[pdbjlvh2]Protein Model on 7yco_B_1_A

Protein Model on 7yco_B_1_A_1 (TEMPLATE: 7yco )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [260 aa]	Repebody (A6)
2	b		A 1 (A)	polymer(polypeptide(L)) [196 aa]	Spike protein S1 :SPIKE_SARS2	624W(Y) 626D 645D(K) 647S(R) 697G(E) 721H(V) 723R(Q) 745S(Y) 746N 747L(Q) 766M(Y) (identity: 18.2 %/31.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7yco_B_1 identity=31.0%

queryA       594:NNIYTLTDKYNLESKSLVELVFSG--NRLDILWN-DDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRL: 690
                :      * * **  **    *     *  *     * *         * *   * *  * *  *     *     ** *  * * *             *:
7yco_B_1      16:DDAFAETIKANLKKKSVTDAVTQNELNSIDQIYAPDSDIKSVQGIQYLPNVRSLKLRSNKLHDI---SALKELTNLTFLFLNLNQLQSLPNGVFDKLTNL: 112
SecStr          :SHHHHHHHHHHHT S TTS B HHHHTT  EEEEEEE     TTGGG TT  EEEEEESS    ---GGGGG TT  EEEEEETT     TTGGGG TT :    
ExpBur          :bebbbeebeeebeeeeeeeebeeeebeebeebebeebebeebebbbebeebebbebebeebeeb---ebbeebeebeebebbbeebeebeeebbeebeeb:    
Contact         :                                b bb                  b b                                           

queryA       691:ELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTT----------------------TKLSMLE: 768
                :  * *  * *  * *   *    *  * *  *    ** *       *  **** * *           *                       * *    :
7yco_B_1     113:KELVLVENQLQSLPDGVFDKLTNLTLLHLMVNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW: 212
SecStr          : EEEEES       TTTTTT TT  EEE TTS      TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS  S   TTTTTT TT  EEE:    
ExpBur          :eebbbbebebeebeeebbeebeebbbbbbbebebeebbebbbeebeebeebbbbebebeebbebbbeebeebebbbbbebebeebeeebbeebeebeebb:    
Contact         :      b                       b b                     bbb                b b b                   b  

queryA       769:LHGNPFECTC-DIGDFRRWMDEHLNV: 793
                :** **  ***  *     *   *  *:
7yco_B_1     213:LHDNPWDCTCPGIRYLSEWINKHSGV: 238
SecStr          :  SS B   TTTTHHHHHHHHHTGGG:    
ExpBur          :bbebebebeeeebebbbebbeeeeeb:

Protein Model on 7yco_B_1_A_1 (TEMPLATE: 7yco )

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