Protein Model on 5wyx_B_1_A_1 (TEMPLATE: 5wyx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) B 1 (B) polymer(polypeptide(L)) [739 aa] Toll-like receptor 8 :TLR8_HUMAN
2 b A 1 (A) polymer(polypeptide(L)) [750 aa] Toll-like receptor 8 :TLR8_HUMAN 261F 262N 264P 265F 266P 320F 346F 351G 352S 353Y 403I 405F 407K 427E 429R 431S 432P 434V 492S 494F 495F 518A 520V 543D 566H 567Y 573V 574T (identity: 100.0 %/93.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5wyx_B_1 identity=93.8%
queryA        32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
                :********************************************************************            ********************:
5wyx_B_1      10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109
SecStr          :  SSSEEEEETTEEEEE  SS  SS  SS  SS  EEE  SS   EE TTTS S TT  EEE TT   ------------   EE TTTTTT TT  EEE:    
ExpBur          :eeebbbeeeeeeeebbebeebebeebbeebbeebbebebbebebeebeeebbeebeebeebbbbebee------------ebbebeebbbeebeebeebb:    

queryA       132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
                :****************************************************************************************************:
5wyx_B_1     110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr          :  SS  SS  SS  TT SEEE  SS   EE HHHHTT TT SEEE  SSBSS SS SS EE TTTTTT TT  EEE  SB  SS  S   TT  EEE TT:    
ExpBur          :bbebebeebbbebbebbeebbbbebebeebeeebbbebeebeebbbbbbbeeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:    

queryA       232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
                :****************************************************************************************************:
5wyx_B_1     210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr          :S   EE TTTTTT TT  EEE TTSS   TT SS     GGG   EE TTTTTT TT  EEE TTS  S   GGGGTT TT  EEE  SS  HHHHHS G:    
ExpBur          :bebeebbeebbeebeebbbbbbbbbbbbeeeeeeeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbebebeebbeebe:    
Contact         :                             bb bbb                                                     b           

queryA       332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
                :****************************************************************************************************:
5wyx_B_1     310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr          :GGGG TT  EEE TT   TT   SS    GGGGG TT  EEE TT   SEE GGGGGGGTT TT  EEE TT    EE GGGGGS SS  EEE TTS   :    
ExpBur          :bbeebeebeebbbbbbeeeeeeeeebebbebbbebeebebbbbebbbbbebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe:    
Contact         :              b    bbb                                                 b b b                   b b b

queryA       432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
                :****                         ***********************************************************************:
5wyx_B_1     410:PLVKXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr          :    -------------------------  TTS SSS SS SS HHHHTTS EEE TTSS SS  TTTTTT    SEEE TTS    B  S TTTTSTT:    
ExpBur          :beee-------------------------eeeeeeebbeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:    
Contact         :b b                                                         b bb                      b b           

queryA       532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
                :************************************     ***********************************************************:
5wyx_B_1     510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYXXXXXVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr          :  EEE  SS  B  STTTTTT TT  EEE TT    -----  B  GGGGG SS  EEE TT     BSS    EESS  EEE TTS HHHHHT TT TT:    
ExpBur          :bebbbbbebebebeeeebbbbbeebbbbbbbebeee-----eebbbebbeebeebeebebbebebebbeeeeebebebbeebbbbbbbbbebbebeeeeb:    
Contact         :           b                      bb     bb                                                         

queryA       632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
                :****************************************************************************************************:
5wyx_B_1     610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr          :TTTTTEETT  EEE  SS  S   HHHHHTS TT SEEE  SS  S   GGGGGG TT  EEE  SS      S HHHH SS  EEE  SS      TTS:    
ExpBur          :eebbeebeebeebbbbebebeebbeebbebbbeebbebbbbebebeebebebbeebeebebbbbebbebeebbeebeebbebbeebbbbebebeebbeeb:    

queryA       732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLEL: 819
                :***********************       **********************************************************:
5wyx_B_1     710:LSEVSSLKHLDLSSNLLKTINKSXXXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLEL: 797
SecStr          :SSS  S  EEE TTS        -------    EEE TT  EE SGGGHHHHHHHHT TTS    GGG BEEESTTTTTSBTTT   :    
ExpBur          :beebebbebbbbbebebeebeee-------eebeebbbbebebebeeebbebeebbeebeebebeebbebebeeeeeeeeebbbebee:

Input Residue Numbers for Focused Sites

ex) 2,15,123