Protein Model on 5awc_B_1_A_1
(TEMPLATE: 
5awc
)Protein Model on 5awc_B_1_A_1
(TEMPLATE: 5awc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [742 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [749 aa] | Toll-like receptor 8 :TLR8_HUMAN | 100V 182Y 183F 184N 261F 262N 263A 264P 265F 266P 346F 348Y 403I 405F 427E 429R 431S 460E 490L 491N 492S 494F 514A 516S 518A 541R 543D 566H 567Y 570I 571A 572G 573V 574T 597Y 600T 601D 622I 627D 628D 629N 630R (identity: 100.0 %/94.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5awc_B_1 identity=94.3% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:*********** ******************************************************** ******************:
5awc_B_1 9:SRSYPCDEKKQXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSSEE --- EEE TTS SS S TT SEEE TTS EE TTSSTT TT EEE S S ------------ EE TTTTTT TT EE:
ExpBur :ebeebbbeeee---eebebeebebeebbeebeeebeebebbebebeebeeeebeebeebbebbbbbbbee------------ebebeebbbeebeebeeb:
Contact : b
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
5awc_B_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E SS SS S TT EEE SS EE HHHHTT TT SEEE SSS TT S EE TTTTTT TT EEE SS SS SS TT SEEE T:
ExpBur :bbbbbebeebbeebbeebbbbbbbbbebbebbeebbbebeebebbebbbbbbeeeeeeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
5awc_B_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE SSTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS :
ExpBur :bbebeebbeeebeebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
5awc_B_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGS TT EEE S TT SB GGGGG TT EEE TT SEE GGGGHHHHT TT EEE TTS EE GGGGGGSS SEEE SS :
ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb:
Contact : b b b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:** *************************************************************************:
5awc_B_1 409:SPXXXXXXXXXXXXXXXXXXXXXXXXXDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : ------------------------- SS TTS SSS S SS HHHHTTS EEE TTS S TTTTTT SEEE TTS S TTTTST:
ExpBur :ee-------------------------eeebebeeebbeeeeeebeeebeeebebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:
Contact :b b bbb b b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
5awc_B_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T EEE SS TTTTTT TT EEE S HHHHT TTS GGGGG TT EEE TTS SS BSS EEE TTS HHHHT TT T:
ExpBur :ebebbbbbebebebeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebebbeeeeebebebbeebbbbbbbbeebbeeebee:
Contact : b b bb bbbbb b bb b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
5awc_B_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTTBTT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S TTT S EEE SS TT:
ExpBur :bbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebebbeebeebeebbbebbebeebbeebeebbebbebbbbbebebeebbee:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817
:************************** ********************************************************:
5awc_B_1 709:FLSEVSSLKHLDLSSNLLKTINKSALXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795
SecStr :SSSS TT EEE SS TTT ----- EEE TT EE SSSSHHHHHHHHH SSB GGGSBEEESTTTTTSBTT :
ExpBur :bbeebebbeebbbbebebeebeeebe-----eebeebbbbebebebeeebbebeebbeeeeebebbebbbbebeeeeebeeebbbee:
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[assembly_id:1]
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