Protein Model on 4r08_B_1_A_1
(TEMPLATE: 
4r08
)Protein Model on 4r08_B_1_A_1
(TEMPLATE: 4r08
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [737 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [743 aa] | Toll-like receptor 8 :TLR8_HUMAN | 100V 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 348Y 403I 405F 427E 429R 431S 459F 460E 490L 491N 492S 494F 514A 516S 518A 541R 543D 566H 567Y 570I 571A 572G 573V 574T 598T 600T 601D 622I 625N 626D 627D 628D 629N 630R 653H (identity: 100.0 %/93.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4r08_B_1 identity=93.8% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
:********* ******************************************************** *******************:
4r08_B_1 10:RSYPCDEKKXXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLRELL: 109
SecStr : SSSEE ---- EEE SS SS S TT SEEE TTS EE TTTTTT EEE S S ------------ EE TTTTTT TT EEE:
ExpBur :eeebbebee----eebebeebebeebbeebbeebeebebbebebeebeeebbeebeebeebbbbebeee------------ebebeebbbeebeebeebb:
Contact : b
queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
:****************************************************************************************************:
4r08_B_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr : SS SS SS TT SEEE SS EE HHHHTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS S TT SEEE TT:
ExpBur :bbebebeebbbbbbebbbbbbbbbbebbebbeebbbebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:
Contact : bbbb
queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
:****************************************************************************************************:
4r08_B_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr :S EE TTTTTT TT EEE TTSS TT SS SGGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS S:
ExpBur :bebeebbeebbeebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeebe:
Contact : bbbbbb
queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
:****************************************************************************************************:
4r08_B_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr :GGGG TT EEE S TT SS GGGGG TT EEE TT SEE GGGGGGGTT TT EEE TTS EE THHHHTSS SEEE SS :
ExpBur :bbeebeebeebbbbebbeeeeeeeebebbeebeebeebebbbbbbbbbeebebebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebebe:
Contact : b b b b b b b
queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
:* *************************************************************************:
4r08_B_1 410:PXXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr : -------------------------- S TTS SSS S SS HHHHTTS EEE SS S TTTTTT SEEE SS S TTTTSTT:
ExpBur :e--------------------------eebebeeebbeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebee:
Contact : bb bbb b b b b
queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
:****************************************************************************************************:
4r08_B_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr : EEE S TTTTTT TT EEE S GGGTT TTS GGGGG SS EEE TTS SS BSS EEE SS HHHHT TT TT:
ExpBur :bebbbbbebebbbeeeebbebbeebbbbbbbebbeebeeeeeebbbbbbeebeebeebebbebbbeebeeeeebebebbeebbbbbbebeebbeeeeeeb:
Contact : b b bb bbbbb b bb b bbbbbb
queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
:****************************************************************************************************:
4r08_B_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr :TTTTTTBTT EEE SS S HHHHTTS TT SEEE SS S GGGGGG TT EEE SS S HHHH S EEE SS TTG:
ExpBur :bebbebbeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbeeb:
Contact : b
queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817
:************************ *******************************************************:
4r08_B_1 710:LSEVSSLKHLDLSSNLLKTINKSAXXXXXXXKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795
SecStr :GGT SS EEE SS S S ------- EEE TT EE SGGGHHHHHHHHTTTTSB GGGSBEEESTTTTTSBTT :
ExpBur :bebbebbeebbbbebebebbeeeb-------ebeebbbeebebebeeebbebeebbeeeeebebeebbebebeeeeebeeebbeee:
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[assembly_id:1]
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