Protein Model on 3w3j_B_1_A_1
(TEMPLATE: 
3w3j
)Protein Model on 3w3j_B_1_A_1
(TEMPLATE: 3w3j
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [746 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [747 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 403I 405F 427E 460E 490L 491N 494F 514A 516S 541R 543D 566H 567Y 569R 570I 571A 572G 573V 574T 598T 600T 601D 622I 625N 627D 628D 629N 630R 747L 749K 773P 775E 805S 806P 807G 810R (identity: 100.0 %/94.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3w3j_B_1 identity=94.8% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:*********** ******************************************************** ******************:
3w3j_B_1 9:SRSYPCDEKKQXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr : SSEEE --- EEE TTS SS S TT EEE TTS EE TTTTTT TT EEE TTSS ------------ EE TTTTTT TT EE:
ExpBur :ebebbbeeeee---ebbebbebebeebbeebeeebbebbbbebebeebeeebbeebeebbebbbbebbee------------ebebeebbbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
3w3j_B_1 109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr :E TTS SS SS TT SEEE SS EE TTTTTT TT SEEE SSS TT EE TTTTTT TT EEE SS SS SS TT SEEE T:
ExpBur :bbbebebeebbeebbeebbbbbbbbbebbebeeebbbebeebeebebbbbbbeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : bbbb
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
3w3j_B_1 209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr :TS EE TTTTTT TT EEE TTSS TT SS GGG EE TTTTTT TT EEE TTS S GGGGTT TT EEE TTS HHHHHS :
ExpBur :bbebeebbeeebeebeebbbbbbbbbbbbbeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeeb:
Contact : bbbbbb
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
3w3j_B_1 309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr :GGGGG TT EEE S TT SS GGGGG TT EEE TT SEE TGGGGGGTT TT EEE SS EE GGGGGGSSS EEE SS :
ExpBur :ebbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbebbbbeebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebeb:
Contact : b b b b
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:** ************************************************************************:
3w3j_B_1 409:SPXXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr : -------------------------- S TTS SSS S SS HHHHTTSEEEE SS TTTTTT EEEEE TTS S TTTTST:
ExpBur :ee--------------------------eebebeeebbeeeeebbeeebeeeeebbbbbebebeebeeebbeebbebbbbbbbbbebebebebebbeebe:
Contact : b bb b b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
3w3j_B_1 509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr :T SEEE SS TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS EESS EEE TTS HHHHT TT T:
ExpBur :ebebbbbbebebbbeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebebbbeeeebebebbeebbbbbbbbeebbeeeeee:
Contact : b b bb bbbbbb b bb b b bbbb
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
3w3j_B_1 609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr :TTTTTTEETT EEE SS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS S GGGT SS EEE SS TT:
ExpBur :bbebbebbeebeebbbbebebeebeeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbeebebbbbbebebeebbee:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817
:***************************************************************************************:
3w3j_B_1 709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795
SecStr :HHHH SS SEEE TTS S SGGG S EEE TT EE SGGGHHHHHHHHT TTSB SSGGG BEEESTTTTTSBGGG :
ExpBur :bbeebebbebbbbbebebebbeeebbeeeeeeebeebbbbebebebeeebbebeebbeeeeebebbebbbbebeeeeeeeeebbeee:
Contact : b b b b bbb b
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[assembly_id:1]
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